Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN05564

FASTA Sequence
Unigene ID: UN05564Length: 926 SSR 
AGAAGCCAGTACTGTGCAATGCCAGTGGTTCAAGATGGAGAACGAAGGGAACACTTGTAATCTACACTCCACTCCATGCTCGTGCT
GAAGGTGATGAGGTCGAAGATCACAGAGTTCAAAAGACGATGATGATCAACGGAATGTCTGTGAACAGAAAGATCCCCAAGAGGAA
GTCATCATCATCATCACACCAAGAAAGCTTCACAGTCAAGAGAACCAGCTTTGAACTCAACAACGGTTTCAGGAACGAGGAAGCTA
GCAACAGGTCGAGTTCAGGATCGGTTGTCTCCAACTCGGAGAGCTGTGATCAGTCCAACGCGTGGTAAACTACTTTTCCTTGTAAG
AAGAGGACATGTGTTGTGGCTGTGGGGCATCGTCCTAAGGCGGCTTCTTCTGTTGAGAAGCTCACTAAGGAGCTCTTTAGTATCTT
ACAAGAGCAGCAGTCTTCTTGTCTCTCTGGTGGTTCTTCAGAGGAAGACTTGCTTTTCGAGAACGAGTCGCCGATGGTGATAGGAC
ATGGGAGTGTACTTATGAGAGATGAGGAGTCTGAAGCTAGCTCACTCTTGGTTGAGAGCTGCAAGTCCTCCTCCTCTTCAGTACCT
TCTGTTGGATTTGAGAGAGGAGGCCAGATGTGTCTGAGCTTTGGTGGGAAAGATATAAAGCAGGAGTTACTCAAGAGGTACAAACC
TCAAGTCTTGGGAAGACCTAGTTTACCACTCTGTAACATAGATTTGAAGGATGTTTTCAACTTTGATGAGTTCATAGAGAAGTTCA
CAGAGGAAGAACAGCGAAAACTGATGAAACTACTTCCTGGAGTTGACTCTGTTGATGTTCCTGATAGCCTGAGAAGCATGTTTGAG
TGCTCTCAATTCAAAGACAACTTCTCCTTGTTTCAGCAACTTGTGGCAGATGGTGTTTTTGAGACA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABD64917 GATA zinc finger containing protein [Brassica oleracea]12261e-132
NP_199525 GATA transcription factor 27 [Arabidopsis thaliana]10551e-112
BAA98109 unnamed protein product [Arabidopsis thaliana]10551e-112
ABD65042 GATA zinc finger containing protein [Brassica oleracea]9761e-103
XP_002865139 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]8425e-088

Swiss-Prot top hits (Blast detail)Scoree value
Q5PP38 GATA transcription factor 2710601e-114
Q8W4H1 GATA transcription factor 267956e-084

TrEMBL top hits (Blast detail)Scoree value
Q2A9V4 GATA zinc finger containing protein12261e-132
Q0WVU5 Putative uncharacterized protein At5g4714010602e-113
Q2A9L7 GATA zinc finger containing protein9761e-103
Q2A9H0 GATA zinc finger containing protein7878e-082
B9N2W6 Predicted protein4751e-045

Arabidopsis top hits (Blast detail)Scoree value
AT5G47140.1 zinc finger (GATA type) family protein10601e-115
AT4G17570.1 zinc finger (GATA type) family protein7956e-085

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
211  50%

Unigene MembersMember information