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Information for unigene UN05566

FASTA Sequence
Unigene ID: UN05566Length: 644 SSR 
CACTAAGAAAACATCATCATAACCAACAACAACAACAAAAAAAGATTTAAAAGACAAAAGCAAATGGGCCATGTAAAAACAAACAA
ACAAAGCTTTGTGTATGTAACTAAAGTTGCTTTGATCAAAAGTTGGGGAAAAAGGAAAGATTTAGACTAACATTTTGGAACGAAGC
TTATTAGCTACATACAAGAGATGGCTGATGTTGGTAGTTGGATAATGTTGAAGTAACTTCATATTCGATGTGAAATCTCCAGCGAT
CAACCTCCTCCTCACCAGTACCAGCATCGCACAACATATCCCCAGTAAGCTTTCCAGAGGACCTTCGGGGTCACTTAAGAGTGCAT
CCCATATGTGAAGACAGTCGAAGAAACTAAACTCTTGTGTAAGGAGGAGAGTGATCCACCTAAATGCATAGAACTGTGGGTTTACT
TTTGTGGTGATCTCTAGATGACGCCAAAGTTCCTCATCATGCTTCCTAACAAGCTGCGAAAGCCTAGTTATTGCGGACCGGATTCC
AACCACGCTATTGTCAAGTTGTTGACAGTAGAAGTCACGAAATCCACCCAACAGTTCAACAAAGCAGAAGAAGGCATCAGCTTCAG
CATGAGATGAACTATCTTCATCAGGGTCGTTACGGAACACAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892244 RabGAP/TBC domain-containing protein [Arabidopsis lyrata subsp. lyrata]8593e-090
NP_171975 RabGAP/TBC domain-containing protein [Arabidopsis thaliana]8494e-089
NP_001184908 RabGAP/TBC domain-containing protein [Arabidopsis thaliana]7949e-083
XP_002271213 PREDICTED: hypothetical protein [Vitis vinifera]7194e-074
XP_002518065 conserved hypothetical protein [Ricinus communis]7132e-073

Swiss-Prot top hits (Blast detail)Scoree value
Q8R3D1 TBC1 domain family member 133536e-033
Q9NVG8 TBC1 domain family member 132452e-020
Q9URY3 TBC domain-containing protein C1952.17c2003e-015
Q95KI1 TBC1 domain family member 22A (Fragment)1753e-012
Q8R5A6 TBC1 domain family member 22A1753e-012

TrEMBL top hits (Blast detail)Scoree value
Q84K76 Putative uncharacterized protein At1g048308493e-089
B9RWE6 Putative uncharacterized protein7132e-073
B9GFV7 Predicted protein (Fragment)7042e-072
B9N0R8 Predicted protein6971e-071
Q9SVN9 Putative uncharacterized protein AT4g137306933e-071

Arabidopsis top hits (Blast detail)Scoree value
AT1G04830.1 RabGAP/TBC domain-containing protein8501e-091
AT4G13730.1 RabGAP/TBC domain-containing protein6932e-073
AT4G13730.2 RabGAP/TBC domain-containing protein4763e-048
AT2G30710.1 RabGAP/TBC domain-containing protein1701e-012
AT5G54780.1 RAB GTPase activator1233e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information