Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN05578

FASTA Sequence
Unigene ID: UN05578Length: 1047 SSR 
GTGAAGCTTTCACAGGACTCTGGGAATTCGCTAAGCTCACTGTCTCCTCCGGTGTCATGATCTGCTTGGAGAATTGGTATTATAAG
ATTTTAATTCTGATGACTGGAAATCTGAAGGATGCAAAAATTGCTGTTGACTCCTTGTCTATATGCATGTCGATAAATGGACTGGA
GATGATGATTCCAATTGCTTTCCTCGCCGGGACCGGCGTACGAGTGGCGAATGAACTAGGGAGCAGGAAGTGGGAAACGAGCAAGA
TTTGCTATGATCGTATCAGTGACACAGTCCTTACTCGTCGGAATAATATTTTCGGTGCTAGTAGTATTTCTTCGCGATCAAATCGG
TTGGATCTTCTCCTCAAGTGAAACCGTCATAAAAGCAGTCAATGATCTCTCTATTCTTTTAGCCTTTACGATTCTTCTCAACAGTG
TCCAACCAGTTCTTTCCGGTGTTGCGATTGGTTCGGGTTGGCAATCATTTGTGGCGTATATAAATTTGGGGTGCTATTATTTCATC
GGACTTCCACTAGGATTTGTCATGGGCTGGATTTTCAAATCTGGCGTTAAGGTAAACGCCAGTTTTCTTTTAATATAAATAAATTT
CAGAATGTAAAGATTAACTCCTTAATCTTTGTGTGTGTGTGTGTTGTGCATATTGTGATTTTACGTGTAAGGGCCTTTGGGGCGGT
ATGATATTCGGAGGAACTGGGATTCAAACATTGATATTGATTTTTATAGTTGTAAGATGCGACTGGGAAAAAGAGGCACAAAAGGC
AACTGCACGCGTTAGAAAATGGTCGACCTCAGGCTCAGAGGCAATAAATTGAACATTGCATAATATGTATACAATAGTATAGCTAT
ACTCCATAAAACTAGGCCGTGGTTATGAGTAAAGCGCATGCGGTATAGTGTCAATCTCACAAGTTTAATCAACTAAAACTGGCAAC
TGGAAGATCAGTATAGTATATGTTTTGGTTTCGTAGACGGAAACTGGAGCAGTGATTGATTTGTGTTCCTTTACGGATAAGGAATT
AAATAACTTTCACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAZ66942 117M18_23 [Brassica rapa]5254e-051
AAZ66940 117M18_21 [Brassica rapa]5192e-050
XP_002865386 mate efflux family protein [Arabidopsis lyrata subsp. lyrata]4941e-047
NP_199218 mate efflux domain-containing protein [Arabidopsis thaliana]4904e-047
NP_196604 MATE efflux family protein [Arabidopsis thaliana]4384e-041

Swiss-Prot top hits (Blast detail)Scoree value
Q9LYT3 Protein TRANSPARENT TESTA 122482e-020
Q5RFD2 Multidrug and toxin extrusion protein 11594e-010
Q96FL8 Multidrug and toxin extrusion protein 11532e-009
A7KAU3 Multidrug and toxin extrusion protein 21452e-008
Q86VL8 Multidrug and toxin extrusion protein 21415e-008

TrEMBL top hits (Blast detail)Scoree value
Q4ABZ7 117M18_235252e-051
Q4ABZ9 117M18_215191e-050
Q9FNC1 Emb|CAB89401.14903e-047
Q1PDX9 Ripening-responsive protein4383e-041
Q9FKQ1 AT5g65380/MNA5_114357e-041

Arabidopsis top hits (Blast detail)Scoree value
AT5G44050.1 MATE efflux family protein4902e-049
AT5G10420.1 antiporter/ drug transporter4382e-043
AT5G65380.1 ripening-responsive protein, putative4354e-043
AT1G33090.1 MATE efflux family protein3216e-030
AT1G33110.1 MATE efflux family protein3144e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information