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Information for unigene UN05588

FASTA Sequence
Unigene ID: UN05588Length: 1246 SSR 
GGAACGACAGAGAGAAAACATTTCCTCTTTAAAATTTTGAATTTCAAGAGACGTTTATTTGACGACAGAGAAAACACTATCCACCC
ACACACAATTTTCTGGAGCTGGAAATAGAAAACAAAAGCTTTGTTTTTTCCATAGAAAGATTGATCTGAAGCTAAAGAAGAAAATG
GGAGAATCTGCAGTTCTAGCTCATTCGTATTCCTTCGCAGCTCCTATTACCCGTTCTGATTCTCATGAGGATAACACGATCCCTGC
GCTTAGCCAATCGATATCCTTTGGGAAGTTCATGAGTGAGGATCTCGAATGGGGCAAATGGTCTACCTTTTCGCACAAGAAGTACG
TTGAAGAAGCTGAGAAGTACTCTCGTCCTGGCTCCGTTGCTCAGAAGAAAGCTTTCTTCGGAGCTCACTACAAGCGTATAGCCGAA
GCCAAGAAAGCTGCAGCGGAAGAACAACCAACGGTCACGCCTGCCGAAGTTTTGCTCCACGCTTTGGAAACACAGCCTCCGTTGAG
TTTGTTACCAGAGGAAGAACCCCTCGAAAGGAGAAGTATTCATAACCATGAAGACGTTCTTGTTGCTGTGGATGATTCATTAGAAG
AGAAGAAGAAGCAAGATGAAGAAGAGGTGGTGTTGAAAGAGGATTGCTCTGTTGATGAAAAGGAGAAAACTAAAACAAAGAAGAAA
CCGGTGTTTAGATTGTCTCTGGAGAAAACAATCCCTCCTGCTAAACCTATAGAGATTGCTCCATCAGAGAAAACAAGTGAAAGACA
TCAGATGATTCAGAGTTCAGGGGTTCAACGCCAGAAATTCAGTTTCTTGAACTGTTTCATTGGTAATTCTAAAACTCGAGATCAGA
GTCAGAACATGAGAAAGACGGAGAAGAAGAACCAAAAGAAGAAGCAGTTCATGTGTCTTTGTTTGAAACCAAAGACTATAAGAGAA
TCATAAAGGAAAGCAAAAAGAAGCAGCTTAAAGAATACAACTTTGAAGCAAGCTCTTTACACAAATGGCAAATGGGAGAAATAAAA
AGATTTTGACTTCATGGTTCGATCAAGCTACTTAGAGTGATTAAACACGGAACGATTTTATTACCGTAGATGGCACCGATTATACT
CTTTTATTACCAATTTTAAAGATTTGAGTGCATTAGGAAGAAGAAGAAGAATAGCTTCTTTTGTTTAAGTCCTTTTGATCTCAGTC
TCCTTATGTAATGAAAGAACGAGTCCGATTCTTTTTGGTCTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566816 uncharacterized protein [Arabidopsis thaliana]8428e-088
AAM63218 unknown [Arabidopsis thaliana]8428e-088
NP_001189988 uncharacterized protein [Arabidopsis thaliana]8428e-088
XP_002875381 hypothetical protein ARALYDRAFT_484524 [Arabidopsis lyrata subsp. lyrata]8411e-087
NP_001189987 uncharacterized protein [Arabidopsis thaliana]6618e-067

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LDH0 Putative uncharacterized protein8425e-088
Q9LTZ4 Gb|AAF01554.18425e-088
B3H4M9 Uncharacterized protein At5g40700.34232e-039
Q5PP69 At5g407004232e-039
Q9FM28 Dbj|BAA95710.14232e-039

Arabidopsis top hits (Blast detail)Scoree value
AT3G27350.1 unknown protein8423e-090
AT5G40700.1 unknown protein4231e-041
AT5G40700.2 unknown protein4231e-041
AT5G40700.3 unknown protein4231e-041
AT3G01710.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Targeting for Xklp2 (InterPro:IPR009675); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27350.1); Has 1029 Blast hits to 851 proteins in 111 species: Archae - 0; Bacteria - 24; Metazoa - 456; Fungi - 52; Plants - 192; Viruses - 7; Other Eukaryotes - 298 (source: NCBI BLink).2724e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information