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Information for unigene UN05594
| FASTA Sequence |
| Unigene ID: UN05594 | Length: 1160 |
SSR | | CCAAAACTAATAGACAACAGAGAGAGAGAGATAAAGGAAAAGATGATTGAGACGGTTAAGCACCTGATTGGCTCCGGTGGCCCAAG
CGGGTTCGGATCAAGATCCACAGCCGAACATGTCACTTCTAAATCTGACCTACGATCTCTTACCGCCGTCATCACTGGAGCGACGT
CGGGTATAGGAGCGGAGACGGCGCGAGTTCTGGCAAAGCGTGGAGCGAGGCTTGTGATTCCGGCTCGGAGTCTCAAAACTGCCGAG
GAAACAAAGTCACGTATCCTCTCCGAGTTTCCTGATGCGGAGATCATCGTCATGCATCTCGATCTCAGCTCCCTCGCCTCTGTTCG
TCGATTCGTAGACGATTTCGAATCTCTTCATCTCCCTCTCAACATCCTCATCAACAATGCCGGAAAATACGCGCACAAGCACGCCA
TCTCTGAGGACGGCGTTGAGATGACCTTCGCCACTAATTATCTCGGCCATTTTCTGCTCACTAAACTGCTGTTAAAGAATCTGATC
GAAACGGCGGCGCTAACTGGCGTTCAAGGCCGCATCGTCAACGTTACATCGGTGGTCCACAGCTGGTTCTCTGGCTATATGTTGCA
ATATCTCGCCGATATCTCCCGAAACAATAGAAGCTACGACGCGACCCGAGCGTACGCGCTCTCCAAGCTCGCCAATGTTCTTCACA
CCATAGAACTCTCCCGGATTCTGCATAAAATGGATGCTAATGTAACGGCCAACTGTGTTCATCCTGGAATCGTGAGAACACGTCTC
ACACGAGACCGAGAGGGTCTCATCACTGATTTAGTCTTTTTCTTGACCTCCAAGCTATTGAAGTCCGTTCCTCAGGCAGCAGCAAC
TACTTGCTACGTGGCAACTAGCCCCAGATTGAGGAACGTGTGCGGCAAATACTTCTCGGACTGCAACGAAGCTCGGACATCTAAAC
TGGGATCGTGCAGTGTTAAAGCTCAGAGACTATGGACTGCTTCTGAGTTGCTGATTTCTCCAGCTTCCTGTACTCCCCAACTTTAC
CAAACCTGTAAATACTCTTTAACCAACGATGTTATATGTAAATCCCAAGCCCTGTAATAACATCTATATATATGTAGCTTTTCTAT
AGATATAATATAGGTATACATAGACTATTAGCTAGATGAAAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002887872 short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] | 1556 | 1e-170 |
| NP_176640 putative short-chain dehydrogenase [Arabidopsis thaliana] | 1534 | 4e-168 |
| XP_002518876 short-chain dehydrogenase, putative [Ricinus communis] | 1246 | 1e-134 |
| XP_002299444 predicted protein [Populus trichocarpa] | 1209 | 2e-130 |
| XP_002869743 short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] | 1209 | 2e-130 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q91WL8 WW domain-containing oxidoreductase | 418 | 4e-040 |
| Q9NZC7 WW domain-containing oxidoreductase | 416 | 8e-040 |
| Q5F389 WW domain-containing oxidoreductase | 415 | 1e-039 |
| Q5R9W5 WW domain-containing oxidoreductase | 415 | 1e-039 |
| Q8VBZ0 Dehydrogenase/reductase SDR family member on chromosome X homolog | 399 | 7e-038 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SGV6 At1g64590/F1N19_15 | 1534 | 3e-168 |
| B9RYQ7 Short-chain dehydrogenase, putative | 1246 | 7e-135 |
| B9GL13 Predicted protein (Fragment) | 1209 | 1e-130 |
| O22985 AT4g24050/T19F6_40 | 1207 | 2e-130 |
| B9GXU5 Predicted protein (Fragment) | 1170 | 5e-126 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G64590.1 short-chain dehydrogenase/reductase (SDR) family protein | 1534 | 2e-170 |
| AT4G24050.1 short-chain dehydrogenase/reductase (SDR) family protein | 1207 | 1e-132 |
| AT5G50130.1 short-chain dehydrogenase/reductase (SDR) family protein | 813 | 6e-087 |
| AT5G02540.1 short-chain dehydrogenase/reductase (SDR) family protein | 760 | 9e-081 |
| AT5G50130.2 short-chain dehydrogenase/reductase (SDR) family protein | 696 | 2e-073 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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