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Information for unigene UN05594

FASTA Sequence
Unigene ID: UN05594Length: 1160 SSR 
CCAAAACTAATAGACAACAGAGAGAGAGAGATAAAGGAAAAGATGATTGAGACGGTTAAGCACCTGATTGGCTCCGGTGGCCCAAG
CGGGTTCGGATCAAGATCCACAGCCGAACATGTCACTTCTAAATCTGACCTACGATCTCTTACCGCCGTCATCACTGGAGCGACGT
CGGGTATAGGAGCGGAGACGGCGCGAGTTCTGGCAAAGCGTGGAGCGAGGCTTGTGATTCCGGCTCGGAGTCTCAAAACTGCCGAG
GAAACAAAGTCACGTATCCTCTCCGAGTTTCCTGATGCGGAGATCATCGTCATGCATCTCGATCTCAGCTCCCTCGCCTCTGTTCG
TCGATTCGTAGACGATTTCGAATCTCTTCATCTCCCTCTCAACATCCTCATCAACAATGCCGGAAAATACGCGCACAAGCACGCCA
TCTCTGAGGACGGCGTTGAGATGACCTTCGCCACTAATTATCTCGGCCATTTTCTGCTCACTAAACTGCTGTTAAAGAATCTGATC
GAAACGGCGGCGCTAACTGGCGTTCAAGGCCGCATCGTCAACGTTACATCGGTGGTCCACAGCTGGTTCTCTGGCTATATGTTGCA
ATATCTCGCCGATATCTCCCGAAACAATAGAAGCTACGACGCGACCCGAGCGTACGCGCTCTCCAAGCTCGCCAATGTTCTTCACA
CCATAGAACTCTCCCGGATTCTGCATAAAATGGATGCTAATGTAACGGCCAACTGTGTTCATCCTGGAATCGTGAGAACACGTCTC
ACACGAGACCGAGAGGGTCTCATCACTGATTTAGTCTTTTTCTTGACCTCCAAGCTATTGAAGTCCGTTCCTCAGGCAGCAGCAAC
TACTTGCTACGTGGCAACTAGCCCCAGATTGAGGAACGTGTGCGGCAAATACTTCTCGGACTGCAACGAAGCTCGGACATCTAAAC
TGGGATCGTGCAGTGTTAAAGCTCAGAGACTATGGACTGCTTCTGAGTTGCTGATTTCTCCAGCTTCCTGTACTCCCCAACTTTAC
CAAACCTGTAAATACTCTTTAACCAACGATGTTATATGTAAATCCCAAGCCCTGTAATAACATCTATATATATGTAGCTTTTCTAT
AGATATAATATAGGTATACATAGACTATTAGCTAGATGAAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887872 short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]15561e-170
NP_176640 putative short-chain dehydrogenase [Arabidopsis thaliana]15344e-168
XP_002518876 short-chain dehydrogenase, putative [Ricinus communis]12461e-134
XP_002299444 predicted protein [Populus trichocarpa]12092e-130
XP_002869743 short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]12092e-130

Swiss-Prot top hits (Blast detail)Scoree value
Q91WL8 WW domain-containing oxidoreductase4184e-040
Q9NZC7 WW domain-containing oxidoreductase4168e-040
Q5F389 WW domain-containing oxidoreductase4151e-039
Q5R9W5 WW domain-containing oxidoreductase4151e-039
Q8VBZ0 Dehydrogenase/reductase SDR family member on chromosome X homolog3997e-038

TrEMBL top hits (Blast detail)Scoree value
Q9SGV6 At1g64590/F1N19_1515343e-168
B9RYQ7 Short-chain dehydrogenase, putative12467e-135
B9GL13 Predicted protein (Fragment)12091e-130
O22985 AT4g24050/T19F6_4012072e-130
B9GXU5 Predicted protein (Fragment)11705e-126

Arabidopsis top hits (Blast detail)Scoree value
AT1G64590.1 short-chain dehydrogenase/reductase (SDR) family protein15342e-170
AT4G24050.1 short-chain dehydrogenase/reductase (SDR) family protein12071e-132
AT5G50130.1 short-chain dehydrogenase/reductase (SDR) family protein8136e-087
AT5G02540.1 short-chain dehydrogenase/reductase (SDR) family protein7609e-081
AT5G50130.2 short-chain dehydrogenase/reductase (SDR) family protein6962e-073

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  33%
 
101  33%
 
211  33%

Unigene MembersMember information