Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN05633

FASTA Sequence
Unigene ID: UN05633Length: 1356 SSR 
GGGACCAGAATCATTTAAATTTAAAAAAATTTAAATCGAATTAAAAAGAAAAGAGGAAAACCCTAGCTTTCTCCGTCTCTCTCTCT
CTCTCTCTCTCTCACCTTGAGAAAGTCTCGAGACTTTTTGAGAGTCGAACCTCGAAATATGTACAAGGAACGTAGTGGTGGTGGAT
CGTCAAGATCGGAGATCCTCGGCGGAGCAGTTGACCGGAAACGAATCAACGACGCACTCACCAAGAAGCTAGAGAAATCTTCACCT
TCCACCTCTAGAGCTTTCGCTTCCACTGCTGCTAAACCTCAGCTTCCTGATGTGGAGTCTGAAACGGACAGTGAAGAAGGTTCGGA
TGTGAGTGGATCGGAGGGTGATGAAGAGACATCGTGGATCTCGTGGTTTTGCAACTTGAGAGGGAATGATTTCTTCTGCGAAGTGG
ATGAGGATTATATACAAGATGATTTCAATCTTTGTGGGTTAAGTGGTCAAGTTCCTTACTATGATACGCGCTGATCTCATCTGGAT
GTCGAGTCTTCAAACAGCGAGATGTTTACTGAAGAACAGAATGAACTTGTGGAATCAGCTGCTGAGATGCTGTATGGTCTTATTCA
TGTCCGTTACATTTTGACTACTAAAGGAATGGCTGCAATGACTGAGAAGTACAAGAACTGTGACTTCGGGGGGTGTCCGAGAGTGT
TCTGTTGCGGACAGTCTTGTCTTCCTGTTGGACAGTCTGATATCCCGAGATCGAGTACTGTGAAGATATACTGCCCCAAATGCGAA
GATATTTCTTACCCGCGATCTAAGTTCCAAGGCAATATTGATGGGGCTTACTTTGGAACCACGTTCCCTCACTTGTTCTTGATGAC
ATATGGGAATTTGAAGCCGCAGAAACCGACTCAGAAGTATGTTCCAAGAATATTTGGGTTCAAGGTACACAAACCATGATATACAC
TACTAGTGTAAGCATTCTCAGTGGTGATAGATACATCTTAGTGGCTTGGTTTGAGCAATTTGAAACGGTAGTTGCGATTCAAGTGG
AGGCACACACCATTCAGTCACTGGAATCTGGAAAGAATCTCTCATCAAGTACCAAGAAAACTCATCGCAACAGCCTGGCTCGTTGG
GGGAGAAGAGAAACACCAATCTGTACTCCGAAATATTTTTCCCCAGTTAGTTAGATTTTTTTGTTTTCCCTGTTGTTTTTTTTTAT
GTTCTCAGCTTATTTGGTTATTTTTAAAACTCGGAAATTGTTCAATTCAGTTGTAACTTTTGAAACTTACATTTTAGTTGGTGTAC
ACTTATTGGAAGAGAGACGATTCTAAATGATCTTCTATATAATGATTAGTAAATAGTTCACATGGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191584 casein kinase 2 subunit beta-3 [Arabidopsis thaliana]12192e-131
XP_002878325 hypothetical protein ARALYDRAFT_486495 [Arabidopsis lyrata subsp. lyrata]10821e-115
ACU23831 unknown [Glycine max]10212e-108
ACU20102 unknown [Glycine max]10141e-107
XP_002881976 hypothetical protein ARALYDRAFT_483599 [Arabidopsis lyrata subsp. lyrata]10112e-107

Swiss-Prot top hits (Blast detail)Scoree value
O81275 Casein kinase II subunit beta-312197e-133
O80507 Putative casein kinase II subunit beta-410038e-108
P40228 Casein kinase II subunit beta9284e-099
P40229 Casein kinase II subunit beta'9096e-097
Q54PF1 Casein kinase II subunit beta5996e-061

TrEMBL top hits (Blast detail)Scoree value
Q24JI1 At3g6025012191e-131
C6TLN9 Putative uncharacterized protein10211e-108
C6TE50 Putative uncharacterized protein10147e-108
B6TNU8 Casein kinase II subunit beta-49725e-103
Q8LPD2 Protein kinase Ck2 regulatory subunit 29627e-102

Arabidopsis top hits (Blast detail)Scoree value
AT3G60250.1 CKB3; protein kinase regulator/ transcription factor binding12205e-134
AT3G60250.2 CKB3; protein kinase regulator/ transcription factor binding11972e-131
AT2G44680.1 CKB4 (CASEIN KINASE II BETA SUBUNIT 4); protein serine/threonine kinase11506e-126
AT2G44680.2 CKB4 (CASEIN KINASE II BETA SUBUNIT 4); protein serine/threonine kinase11273e-123
AT5G47080.1 CKB1; protein kinase regulator9293e-100

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  50%
 
112  50%

Unigene MembersMember information