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Information for unigene UN05636
| FASTA Sequence |
| Unigene ID: UN05636 | Length: 1364 |
SSR | | GGGGCGGTTGTTAATGTCTCCTACGAGCTTCCTCAGTTTATATCTTCTTCTCGGTTATATCGATATCCTTCTGGTTGCTTGATTCA
AGACATGGCCAATGGCTATTCCAAGGTTACTTGGGTTGAACATGTGGAAATCTCGGAGCAAGAACCGGTACATGAGATGTTTAAAG
ATACTGTCCGTGAGGGATTAGCTTTCGGAGCTGAACGTTGGATCGCTTCTCTCCTAAGAATGTGCGAGAGACTCACGGCTCTAATG
GAACCGGCAACATCCTCGGCGATTCCATCGCCGGAAGGGAAGAGGAGTATAATGAAACTTGCTCAAAGAATGGTGGGCAACTTCTG
TTTGAGCGTTGGCACATCTAACAACACTCGATCAACGGTTGTTTCGGGAATGAATGAGTTTGGAATCCGTGTGACTTCGTATAAGA
GCCAGCACGAACCAAACGGAACGGTTCTGTGTGCAGCCACCAGCTTCTGGCTCCCAGTTTCTCCACTTATCGTATTCAATTTCCTC
AAAGATGAGAGAACTCGTCCTCAGTGGGATGTTCTTTTGAATGGAAGTTCAGTTCAAGAAGTAGCGCATATCGCAAACGGTTCACA
TCCAGGAAACTGCATTTCTGTTCTTCGTGGATTCAATGCATCATCATCGCAAAACAACATGTTGATTCTGCAAGAAAGCTGCGTAG
ACTCATCAGGCTCGCTTGTGGTCTACACTCCAGTGGATCTACCAGCACTAAACATGGCGATGAGCGGTCAAGACCCATCTTATATT
CCCATTCTACCCTCTGGTTTTGCTATTTTACCAGATGGAAGCAGGAATAAACAAACACCAGAGCTTAAAGCTGAAGGAGGAGGAGG
AGGAGGTCCATTGATAACGGTTGGGTTTCAGATAATGGTGAGTAGTTTGCAGTCAGGGAAATTGAATATGGAGTCAATGGAAACAG
TTAATAACCTCATCAGTTCCACTGTCCACCACATTAAAACCACCTTGAATTGTCCTTCAACTGCTTGAGGACGCCATTAAAAGCTC
ATTTTTCCCCATCTGATTTCTGAGAAGGGTCTTTAATGATCAGAGGAGTGAAAGTTATTAAGCACTTATATTCTACCTTCAGTGCC
AGCAAAGAGTGTAAGAAAATCATTACTCTTCTGGTTACATGTCTCTTCTTTTCACTCTCTTGTTCATTTTTTTTGTTTCTGAAGTT
TTTTGTGTGTGTTTGAAATGGTAATTAGTTGGAGGTGGGAGTCAAGAACGCACCATGCTCTTTGTGTATGGTTCGGGCATTGACTT
CTGTTTGTTTCTTTTGTCTGGTTACAGTTGTTAAGTTACTTTTTTCTTAGCTACATTTCTTCTAAACTTTATCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564041 homeobox-leucine zipper protein HDG12 [Arabidopsis thaliana] | 1179 | 8e-127 |
| XP_002527933 homeobox protein, putative [Ricinus communis] | 1097 | 2e-117 |
| NP_567274 homeobox-leucine zipper protein PROTODERMAL FACTOR 2 [Arabidopsis thaliana] | 861 | 6e-090 |
| CAB81031 putative homeotic protein [Arabidopsis thaliana] | 861 | 6e-090 |
| BAJ33954 unnamed protein product [Thellungiella halophila] | 853 | 5e-089 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LMT8 Homeobox-leucine zipper protein HDG12 | 1393 | 5e-153 |
| Q9FX31 Homeobox-leucine zipper protein HDG11 | 1177 | 5e-128 |
| Q69T58 Homeobox-leucine zipper protein ROC8 | 937 | 4e-100 |
| Q93V99 Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 | 861 | 2e-091 |
| Q94C37 Homeobox-leucine zipper protein HDG2 | 821 | 1e-086 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0SUW2 Putative uncharacterized protein At1g17920 (Fragment) | 1179 | 5e-127 |
| B9SPL4 Homeobox protein, putative | 1097 | 2e-117 |
| A5C0J7 Putative uncharacterized protein | 845 | 3e-088 |
| B9RXQ1 Homeobox protein, putative | 837 | 2e-087 |
| A5C6G2 Putative uncharacterized protein | 828 | 3e-086 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G17920.1 HDG12 (HOMEODOMAIN GLABROUS 12); transcription factor | 1394 | 3e-154 |
| AT1G73360.1 HDG11 (HOMEODOMAIN GLABROUS 11); DNA binding / transcription factor | 1177 | 5e-129 |
| AT4G04890.1 PDF2 (PROTODERMAL FACTOR 2); DNA binding / transcription factor | 861 | 2e-092 |
| AT1G05230.1 HDG2 (HOMEODOMAIN GLABROUS 2); DNA binding / transcription factor | 823 | 5e-088 |
| AT1G05230.2 HDG2 (HOMEODOMAIN GLABROUS 2); DNA binding / transcription factor | 823 | 5e-088 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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