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Information for unigene UN05650
| FASTA Sequence |
| Unigene ID: UN05650 | Length: 781 |
SSR | | AAGCCAAACTTCATTGTGCATACAGAAAAGTTTCTAACAATTAACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGATATACACTTT
TACATGACAGAGCTTATTTTCTTTTCAAAGAACGTGACACATTTTTCAGACCAAATAAAAAACCACCCACGACGTAGCTATATCCT
GACACTTGAAAAGTGTTGAAAGCAATGTTGTTAATGATGTCATCATTGAGGAGAAGAATGAGCAGGAGGAGCTCTGTAAATGGCAG
GAATGGTTCGAGGGAAGAACATTTGCCTCACACCTTCTGCTTTTATTATTGGAAATATAATCCCTGAAGCACTCGAGATAAGTCTA
GCTCCAAGCCACAATCGTTTAACTGAAGGAAGAGGAACAAGCAAACGACCAACACCGAATATAGCCACAGCGAAGAAATGAAGAAC
AAGACTCATAGGTCTCGGGTTCAAACCCGAGAGCAAAGCCACTGGTCCCGACGAGCAAACACCTCCAAGGCTAAGATAATCAAAGC
AAGCTCGACGCATCTCGCTTCTCGCATCGTCAGGAGATGCCAAGAACACTTTATACAAAGCCCCCGCGAGTGTATTTATAGTCGAC
GCAACAGGTTTCCTCAACGTGTAGAACGACTCAATGTACTTAGACAACGACTCTTTATCGGTCAAGTCCACGAGAGGGTTTAAAAG
ATCACGTAGATGACTATGTCAGACAATGCCACGGTCATACCACCACCTGTTAGAGGGTGACGCATGTTGAACGCGTCGCCAGAAGC
AAGCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAB38924 squalene epoxidase-like protein [Arabidopsis thaliana] | 780 | 6e-081 |
| NP_568033 squalene epoxidase 3 [Arabidopsis thaliana] | 780 | 6e-081 |
| AAM61384 squalene epoxidase-like protein [Arabidopsis thaliana] | 780 | 6e-081 |
| XP_002868966 hypothetical protein ARALYDRAFT_490840 [Arabidopsis lyrata subsp. lyrata] | 773 | 4e-080 |
| XP_002265132 PREDICTED: hypothetical protein [Vitis vinifera] | 676 | 6e-069 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O48651 Squalene monooxygenase | 657 | 5e-068 |
| O65404 Squalene monooxygenase 1,1 | 363 | 6e-034 |
| O65726 Squalene monooxygenase 1,2 | 353 | 9e-033 |
| O65402 Squalene monooxygenase 1,2 | 351 | 1e-032 |
| O65727 Squalene monooxygenase 1,1 | 312 | 5e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LFJ1 Squalene epoxidase-like protein | 780 | 4e-081 |
| Q8VYH2 AT4g37760/T28I19_40 | 780 | 4e-081 |
| Q9T064 Squalene epoxidase-like protein | 780 | 4e-081 |
| B9SX91 Squalene monooxygenase, putative | 668 | 4e-068 |
| B9HFU3 Predicted protein | 667 | 5e-068 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G37760.1 SQE3 (squalene epoxidase 3); squalene monooxygenase | 781 | 2e-083 |
| AT2G22830.1 SQE2 (squalene epoxidase 2); FAD binding / oxidoreductase/ squalene monooxygenase | 659 | 3e-069 |
| AT1G58440.1 XF1; squalene monooxygenase | 600 | 2e-062 |
| AT5G24150.1 SQP1; squalene monooxygenase | 363 | 5e-035 |
| AT5G24160.1 SQE6 (SQUALENE MONOXYGENASE 6); FAD binding / oxidoreductase/ squalene monooxygenase | 351 | 1e-033 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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