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Information for unigene UN05680
| FASTA Sequence |
| Unigene ID: UN05680 | Length: 750 |
SSR | | AGGCACATAAGGAAACCGTAAAGATCCATATAAATAATGAGGCTACAAGAAAATGGGAAAACATATTTTGATTGAAACATAAATCA
ATGTGTTTATTCGGAAGAGTGAGTGCCTAAAAATGAAGAACCTAAAGAGAACAAAACGCTAAACCGGTCAAAAATCTGCTTTAACT
AAACCAAACCAAAAACAGAAATAGCCATGATCGCAAAGACGACAAAACAGGAACCAATGAACTGGACTGTTGTTTTCAAGGCATTG
CTCTTTTTGTGAGTCGACGCCGGGGGAGATGGAGGAGAAGAAGAAGAAGAAGTGGACGAAGGAGGAGGAGAATCTGGCGTAGACTC
AGTCTCCATAACTTTGATGATCATCTTCTGACCCTTTTCGCAGTGGCCCGATATACCGCTGATGAAGTAAAACAAACCGGGACGGT
CTAGTTTAAAAACCGTGTCGTCGTTGTTCGAATAAAACTGCGGTTTAGTAGCTTTGCATTTTTTGTACTCGTCTTCTGATACAACT
AACACCGAGTCTTTGTTGTACTTGAAACGGATAGTATCGTCAACTTTAAAGCGATTGTGTGAAGCCCATTGGTTAAACACATCACC
ATGAGTCTTGTTAGATTGTGGTACGATCCAACCATCATCTCCTCCAACCTCTCCTCAGTGAGCCTTTGACATTTGAAAACAGATTC
AATCTTTTGCTCCCATTCCAGATAGACATCAGGATCAGCTTTTCCTTGGAAAGATGGTATCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABL97946 copper ion binding/electron transporter [Brassica rapa] | 668 | 5e-068 |
| XP_002883141 hypothetical protein ARALYDRAFT_479364 [Arabidopsis lyrata subsp. lyrata] | 657 | 1e-066 |
| NP_188489 early nodulin-like protein 5 [Arabidopsis thaliana] | 644 | 3e-065 |
| XP_002894150 hypothetical protein ARALYDRAFT_474039 [Arabidopsis lyrata subsp. lyrata] | 545 | 9e-054 |
| AAF69706 F27J15.27 [Arabidopsis thaliana] | 507 | 2e-049 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SK27 Early nodulin-like protein 1 | 252 | 4e-021 |
| Q9T076 Early nodulin-like protein 2 | 216 | 6e-017 |
| Q8LC95 Early nodulin-like protein 3 | 206 | 9e-016 |
| Q02917 Early nodulin-55-2 | 185 | 2e-013 |
| P29602 Cucumber peeling cupredoxin | 171 | 1e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A1YMY7 Copper ion binding/electron transporter | 668 | 4e-068 |
| Q9LII0 Genomic DNA, chromosome 3, TAC clone:K24M9 | 644 | 2e-065 |
| Q4PSZ8 Plastocyanin-like domain-containing protein | 507 | 2e-049 |
| Q9M996 Early nodulin, putative | 507 | 2e-049 |
| B9N0A5 Predicted protein | 418 | 3e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G18590.1 plastocyanin-like domain-containing protein | 645 | 1e-067 |
| AT1G48940.1 plastocyanin-like domain-containing protein | 507 | 1e-051 |
| AT5G14345.1 copper ion binding / electron carrier | 291 | 1e-026 |
| AT1G79800.1 plastocyanin-like domain-containing protein | 266 | 9e-024 |
| AT4G32490.1 plastocyanin-like domain-containing protein | 261 | 3e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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