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Information for unigene UN05692

FASTA Sequence
Unigene ID: UN05692Length: 1109 SSR 
CATCATATAGTATCTATTGGATAACTTATTTTCTCCAGAACAAAATTTGACAGTTAATAATAGAAATGAGGTACTTAATATAAAAA
ACAGGATAAACAAGAATAATAATCCATCAAAAACGAGTCCAAACACAGTCACACTGAAGTGGAAGTTCTCTTATGAAAGAACTCCA
CATCAATGGCTACATAACGGAAAAAAAAAGAAAGAAACAAATCTATAATCCTCTAAGCTCCGATGATTTCGGTTGGTTCCTCAGCC
ACTGTTTCATCTGGCCTGTCTACTTTCACACCAACATCCTCTGCTGTGTAGTCACCATGAACCTCCATGAGCTTGCCGAGGTCAAA
CTTGGGAGCCTTGAGGATCTTGACTTTACGGATGAACACGTTCTGCAACGGGTAGATGTTTTGAGTCGCTTCTCAATCTCTTTTCC
AATGGCTCAGGGATGAACTTAGCCACAAGCTCTTTAAGGTCACAAGACGAAGCCTCCTTCACCATAATCTCACTCATCTTCCTGCG
GATCTGGCGGACTTGGCTGGATTGAGCATAACAAGTACGCTTGACCTGGTTAGCACGCCTCTTGGTGAAACCAATGCAGAACAGCC
TCAAGGTGTAACTGTCAGTGGTCTTCACATCTACATGGGCTTCAATCAGTGTCTGCCACTTCTTCACCAATGACCTCAGCTTGTCA
GTTGTGAAGTCCATACCCCAGAACTGGGTCAAGACATTCCTGCCCTGGACATCTTCAGCTCTGAGACGGATCTTCCTGTAAGAGTG
GTCCTCATCCTTGTTGAGATCAGCAAGAGACACCTCGAAAACTCTGTGTTTCAGCCCCTCAGATGCAATCTTGGTACCCTGAGTTC
TGGAAACAAGTGTCTTTCCGACATTTCTGTGAGTGAAGTTAGAGGGAGCCTTGATGTCATACCAATCCTTCTTGGAGAAAGGATCA
ACAATCTTCTTCTTCCCTCCTTTACGACCCTTTGAGATCCTCTTGTTCTTCCCGACAGCCATGGTTTGGTGATCTTCAGAAGCTGC
TGCTGACGAACGAGCAACAGCTAAGAAGATGAAGAAGAAGAAGAAGCGGCTTCGACAACTCAGAGAGCAAGCCCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869131 40S ribosomal protein S3A [Arabidopsis lyrata subsp. lyrata]9332e-098
NP_195193 40S ribosomal protein S3a-2 [Arabidopsis thaliana]9322e-098
NP_187135 40S ribosomal protein S3a-1 [Arabidopsis thaliana]9233e-097
XP_002882377 40S ribosomal protein S3A [Arabidopsis lyrata subsp. lyrata]9224e-097
ABK56834 RPS3 [Cymbidium hybrid cultivar]8955e-094

Swiss-Prot top hits (Blast detail)Scoree value
P49396 40S ribosomal protein S3a9338e-100
Q42262 40S ribosomal protein S3a-29321e-099
Q9CAV0 40S ribosomal protein S3a-19231e-098
P49198 40S ribosomal protein S3a8763e-093
P33444 40S ribosomal protein S3a8711e-092

TrEMBL top hits (Blast detail)Scoree value
A0N0S0 RPS38953e-094
B9RER3 40S ribosomal protein S3a, putative8821e-092
C5XD92 Putative uncharacterized protein Sb02g0383708821e-092
C6TLT3 Putative uncharacterized protein8811e-092
C6T5T0 Putative uncharacterized protein8802e-092

Arabidopsis top hits (Blast detail)Scoree value
AT4G34670.1 40S ribosomal protein S3A (RPS3aB)9329e-101
AT3G04840.1 40S ribosomal protein S3A (RPS3aA)9231e-099

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  29%
 
81  14%
 
103  43%
 
61  14%

Unigene MembersMember information