 |
Information for unigene UN05723
| FASTA Sequence |
| Unigene ID: UN05723 | Length: 1629 |
| SNP | TCTCTCCTCTCTACTCGCATTGTGATTCACGAAAACATGTCTCGTCTTCTCAACACGTCATTCCTTCCTTCTTCCACTTGCAGAAC
CCGATCCTCCTCCTCTCCTCATTTCCATGTTAACAAGCCACGAATCGTCACCGTCCGAGCGAAGATCCGAGAGATCTTCATGCCTG
CTCTCAGCTCCACCATGACCGAAGGCAAAATAGTATCCTGGGTCAAATCCGAAGGCGACAAGCTCAACAAAGGAGAGAGCGTTGTG
GTCGTCGAATCCGACAAGGCCGATATGGACGTCGAGACTTTCTACGACGGTTATCTCGCCGCCATCATGGTCGAAGAAGGCGGTGT
CGCTCCCGTCGGATCCGCCATTGCCTTGTTAGCTGAGACTCAGGATGAAATCGCCGACGCTAGGGCTAAAGCTTCCGGTGGTGGTG
GTGGAGGAGCCACTTCTCCTCCTTCTCCACCTCCGGTTGTTGTTGTTGAAGACAAGGTTTCGGTTCCTCCGTCGAAAGTCGTGTCT
GTGTCTGCTTCTGCGGTGCATCCGGCGTCTGAAGGAGGGAAGAGAGTGGTGGCTTCTCCTTATGCGAAGAAGCTAGCCAAGGAGTT
GAAAGTGGAGTTGGCTGGTTTAGTGGGAAGTGGGCCTATGGGAAGGATTGTGGCTAAAGATGTTGAAGCCGCTGTAGCTTCTGCTG
CTGCTCCACCTGTTAAAACTGAGGCTATGACTCCTACTGCTGGTGTTGAGCTCGGCTCCGTGGTTCCATTCACGACAATGCAAGGC
GCTGTGAGCAGAAACATGCTTGACAGCTTGTCCGTTCCTACTTTTAGAGTCGGATACACTATCAACACCGATGCTCTTGATGCTCT
CTACAAGAAGATTAAGTCGAAAGGAGTGACAATGACGGCACTACTAGCAAAGGCAACTGCTCTTGCACTCGCGAAACATCCTGTTG
TTAATTCTTCCTGCAGAGATGGTAACAGTTTTGTGTATAACGCTAGCATCAACATTGCTGTTGCCGTCGCTATTGATGGTGGTTTG
ATCACTCCTGTGCTTCAGAACGCCGATAAGGTTGACATTTATTCATTGTCTAGAAAATGGAAAGAATTGGTTGATAAGGCCCGAGC
TAAGCAGCTGCAGCCTCAGGAGTACAACACTGGTACTTTCACTCTCTCTAACCTCGGAATGTTTGGTGTTGATCGGTTTGATGCAA
TTCTTCCCCCTGGAACTGGAGCGATTATGGCTGTAGGAGCATCGCAACCTACAGTGGTTGCTACTAAAGACGGCCGCATTGGCATG
AAAAACCAGATGCAGGTGAATGTGACTGCAGATCATCGTGTTATCTATGGTGCTGATCTCGCACAGTTCTTGCAAACATTGGCCAG
CATTATTGAGGACCCAAAGGACCTTACTTTTTAGGCCAAATTACTGCTTTTTTTGCAACCCAATCTTCTCTGCTTTTTGATTCCAT
GGGAGCTTTGTATTTCTGCCGTAATCAGTTTCGTTGATAGAATCGACTCTTTTCCTTTAAAAAAAAGTAATGTTGAACATACTCAT
TTGTTTGTTTGATATATCTCCTGCAACATTTGGCACATTGAAAGGCCTTCTCATATGATTTTGTTGCAGAGTTTTTCATAC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_174703 pyruvate dehydrogenase E2 component [Arabidopsis thaliana] | 1925 | 3e-213 |
| AAM60857 dihydrolipoamide S-acetyltransferase, putative [Arabidopsis thaliana] | 1925 | 3e-213 |
| AAF79262 F12K21.24 [Arabidopsis thaliana] | 1912 | 1e-211 |
| XP_002893823 EMB3003 [Arabidopsis lyrata subsp. lyrata] | 1909 | 2e-211 |
| XP_002327232 predicted protein [Populus trichocarpa] | 1669 | 1e-183 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q1RJT3 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | 580 | 1e-058 |
| Q92HK7 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | 574 | 6e-058 |
| Q4ULG1 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | 564 | 8e-057 |
| Q9ZD20 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | 499 | 3e-049 |
| Q68WK6 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | 371 | 2e-034 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LGH6 Dihydrolipoamide S-acetyltransferase, putative | 1925 | 2e-213 |
| Q9C8P0 At1g34430/F7P12_2 | 1925 | 2e-213 |
| Q9LNK4 F12K21.24 | 1912 | 7e-212 |
| B9MW67 Predicted protein | 1669 | 1e-183 |
| B4G1C9 Dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex | 1565 | 1e-171 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G34430.1 EMB3003 (embryo defective 3003); acyltransferase/ dihydrolipoyllysine-residue acetyltransferase/ protein binding | 1926 | 8e-216 |
| AT3G25860.1 LTA2; dihydrolipoyllysine-residue acetyltransferase | 1423 | 2e-157 |
| AT1G54220.1 dihydrolipoamide S-acetyltransferase, putative | 560 | 2e-057 |
| AT1G54220.2 dihydrolipoamide S-acetyltransferase, putative | 560 | 2e-057 |
| AT3G13930.1 dihydrolipoamide S-acetyltransferase, putative | 559 | 3e-057 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
