Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN05737

FASTA Sequence
Unigene ID: UN05737Length: 407 SSR 
TTTTTTTCTATTATAATTCTTCTTCGGTTGAATTATTTAATGTCTATAACATTTTGACGGGGAACAAGTTCTGGTCCCCGGAAACA
ACAACAACAACCACAACACAGTAACATAGAATATCTTACAGAAACAAACTTCTCCATCTCCTTCAATTTATAAATCACATACTCCG
CTTTACTCACACAGCCATTGTTATCAATATCCGCAGCAAAGAACTGAGACACAGACATAGCCTCACGCAGCACTTTCATTGCCCGT
TCCCTATTCCTCTTATCAACTCTCGCCTCAGCCAAACACAGAAAAGCCCGAGCCACGGCTAACGTAGAGACAAGCAGCCACACCGC
AGCGAAAAGCCTGCCGGGCAACGTCTTAAACGCCCTGTCACCATACCCAACGGTAGTAACCGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193550 putative calcium-activated outward-rectifying potassium channel 6 [Arabidopsis thaliana]4242e-040
XP_002870067 hypothetical protein ARALYDRAFT_914875 [Arabidopsis lyrata subsp. lyrata]4242e-040
XP_002863404 hypothetical protein ARALYDRAFT_494336 [Arabidopsis lyrata subsp. lyrata]3893e-036
NP_199449 putative calcium-activated outward-rectifying potassium channel 2 [Arabidopsis thaliana]3633e-033
CAB64717 KCO2 protein [Arabidopsis thaliana]3581e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q9SVV6 Probable calcium-activated outward-rectifying potassium channel 64248e-042
Q9FL25 Probable calcium-activated outward-rectifying potassium channel 23631e-034
Q9XFR0 Probable calcium-activated outward-rectifying potassium channel 33324e-031
Q9S6Z8 Probable calcium-activated outward-rectifying potassium channel 5, chloroplastic2903e-026
Q8LBL1 Calcium-activated outward-rectifying potassium channel 12043e-016

TrEMBL top hits (Blast detail)Scoree value
Q1PDM4 Outward rectifying potassium channel3632e-033
A9QMN9 TPK13524e-032
B9N9B5 Outward rectifying potassium channel3425e-031
B9I109 Outward rectifying potassium channel3417e-031
B9S165 Calcium-activated outward-rectifying potassium channel, putative3417e-031

Arabidopsis top hits (Blast detail)Scoree value
AT4G18160.1 KCO6; outward rectifier potassium channel4241e-042
AT5G46370.1 KCO2 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 2); calcium ion binding / outward rectifier potassium channel3632e-035
AT5G46360.1 KCO3 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 3); calcium ion binding / outward rectifier potassium channel3326e-032
AT4G01840.1 KCO5 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 5); outward rectifier potassium channel2905e-027
AT5G55630.1 ATKCO1; calcium-activated potassium channel/ ion channel/ outward rectifier potassium channel2044e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information