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Information for unigene UN05769

FASTA Sequence
Unigene ID: UN05769Length: 1095 SSR 
CGTCCAAGTTTCTTACTCAGCTTTCTTAAAACTTCAACATGAACAACACGTGATTTTTCTCTTTCCCATGTTTCAGTTAAATAGTA
AATAAAGAGAACCATGACCACAGATAAAACATTTGTATACCAACATAAAAAAAAACAAAACAAAACATGACTAATGCCCCAAGACC
AAAACCCATAAAGCAAGCTTTCTTTGTTCCAACTATATATCCCAGTAATTAAAAAACTTTTGCTATTCTTCCACATAAATGCCAAA
AAATAAAAGCTGCATTCCCTCACAAAGCTCTATATCTACATGAAGTCAAAATCGTCCATGGCATCATAAGGACCAGCTACAAGATC
GTCATCGGCTTATCTACAATAAGTTGTTTCTTCTTGCCACCTGTCTTCTTTCTACCAGCAGCAGCTTCTTTCTCAGCGTTAAGCTT
TTCATTTGCTATTGCTGTAACGGAGGAAGCAACATCTTTAACATCTGCTGCCTTCATGTTGGTCACCGAAAGTCTCATGACTGCTT
TGAGCAATGCGATATAGTGATAACTTTTCTCATAAGGTCTAAGCCTATGAGAAATCATTTCAGCATATTCCAAGAAGTCACTTTCA
GACTTGGGGATGAAGGCGTCAAGTTTTTTCTCTTCACCCTTGGTTCCAAAGAGTTCAGCAGTTGCCCTGTAGTCCGCTTCTTCAAC
AAGCCTCTGCATGCGGAGTTTCTCAGAGAGAGGATCTAAAGGTTCTTCTTTTGGAACTTGAGCTGCTTTGCCCTTTTTCTCAACAG
CTTTTGCTGCTTTCTTCGGAGGAGCAGGATTTACCGGAGCAGGTTTGTCGTCGTTGTCATCATCATCATCATCCTCCCATGAGTCC
TTAATCTCATTCTCATCTACATCTTCATCATCCCAGTTACTTTTAAGCACAACTTTTGCTGGAAGTGGTGCAATTTGTTCATCCTC
CCAGTCATCCATATTTGGTTGTAGTAAAAAAAGACAAAGCTGCTATCAAAATCCAACTTCAGCCAAATCGAAGGAGGAAGAGGAAG
AGGAAGATGAAGACGCGTTTTCGTTGGATCAAATCTCGGCTGCGAAACGACGATATGGGTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002888479 hypothetical protein ARALYDRAFT_475711 [Arabidopsis lyrata subsp. lyrata]8354e-087
NP_564865 Translation initiation factor eIF3 subunit [Arabidopsis thaliana]8159e-085
XP_002870534 hypothetical protein ARALYDRAFT_493723 [Arabidopsis lyrata subsp. lyrata]7387e-076
NP_850918 Translation initiation factor eIF3 subunit [Arabidopsis thaliana]7281e-074
XP_002305897 predicted protein [Populus trichocarpa]7225e-074

Swiss-Prot top hits (Blast detail)Scoree value
Q8I1G8 Eukaryotic translation initiation factor 3 subunit J3039e-027
B4NX24 Eukaryotic translation initiation factor 3 subunit J3021e-026
Q7K550 Eukaryotic translation initiation factor 3 subunit J2966e-026
B4IMQ8 Eukaryotic translation initiation factor 3 subunit J2931e-025
B4QHU5 Eukaryotic translation initiation factor 3 subunit J2931e-025

TrEMBL top hits (Blast detail)Scoree value
Q9C8D8 Putative uncharacterized protein At1g660708263e-086
Q8GRX2 Putative uncharacterized protein7287e-075
B9H3E9 Predicted protein7224e-074
A9P9B6 Putative uncharacterized protein7162e-073
B9S0Q8 Eukaryotic translation initiation factor 3 subunit, putative7134e-073

Arabidopsis top hits (Blast detail)Scoree value
AT1G66070.1 translation initiation factor-related8262e-088
AT5G37475.1 translation initiation factor-related7284e-077

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  25%
 
63  75%

Unigene MembersMember information