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Information for unigene UN05775

FASTA Sequence
Unigene ID: UN05775Length: 886 SSR 
GTAGTTCTGTTCATTGGGATACTGACGCATTGGAAACTCATCATCCTCCATCAGTAGGAGGAAGCAGCAGAGAAAACGCCATTTCC
ATATCTACAACAGCCAATGAAATTGCAGAAAGAAAGAATCAGTCCACTGTGGAAGATAGTTCCTCGACTTGTTCTAACGATTCTAT
CAGGTCTGGGTTTACCAATGGGTCCTACAAAGGGAATGCCTTGAATGTCCAAAACCAGAATTCGCCAGACAAAGGAAAGAACCAAC
CAAGGAGTCAGAATTCTACTTCTGAATCTGACTGGGTTGTTGTCTCCCACAACCAAGAGCCAGAGAGCTCTAAGAATCATCGTAGT
CCCGTTGGGAAGGAACGCAACGTGGCTCAAATCATTGTGAACTCGGTTGACATGGATCGACCTAAAGAGAAAAGCGCTGCTGTACT
TACTGCTGCCAAGAATCCTTCACCACTAACTCAGACAAAACTGGAGAAAAAGAGCGCATACGCTGTTCCAAACAAGAATGTGATGC
CAGCAAGTGGACCACCTTCATCAAATCAAGTAGTGCCTCCTTCTTCAGATATGCAAAAGATCTCTGCTCCAAAACAACAACCTGCA
ACAACAACAACAACTATAACAAGGCCTTCTAGTGCTCCAGTAATCCCTGCTGCGATGCGACCAACCCCTATTGTCGTCTCCTCGGT
TCAACCAACAACATCCTTTCCTCGGTCGGTTAGCTCAGCTGGTCGTCTAGGTCCCGAGTCTTCACTACGCAACCAGCAAAGTTACA
CTCCTCACTCCTATAAACACGCCATAGTCGGCAACTCTCCTGGTTCAACAACTAGTTTCAACCACCACCCAACCACATTTCCATCA
GCATCTTACTCACAAGCAGCGACATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAF01316 hypothetical protein [Arabidopsis thaliana]6382e-064
XP_002892207 hypothetical protein ARALYDRAFT_470409 [Arabidopsis lyrata subsp. lyrata]6373e-064
AAB70446 F19P19.26 [Arabidopsis thaliana]6338e-064
NP_001077455 MATH domain-containing protein [Arabidopsis thaliana]6338e-064
NP_001077454 MATH domain-containing protein [Arabidopsis thaliana]6338e-064

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q0WNI3 Putative uncharacterized protein At1g043006381e-064
A8MQL1 Uncharacterized protein At1g04300.36335e-064
A8MR11 Uncharacterized protein At1g04300.16335e-064
P93826 F19P19.266335e-064
Q0WV70 Putative uncharacterized protein At5g435602681e-021

Arabidopsis top hits (Blast detail)Scoree value
AT1G04300.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083), TRAF-type (InterPro:IPR013322); BEST Arabidopsis thaliana protein match is: meprin and TRAF homology domain-containing protein / MATH domain-containing protein (TAIR:AT5G43560.2); Has 15585 Blast hits to 9972 proteins in 679 species: Archae - 16; Bacteria - 1260; Metazoa - 5683; Fungi - 2012; Plants - 671; Viruses - 109; Other Eukaryotes - 5834 (source: NCBI BLink).6333e-066
AT1G04300.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: meprin and TRAF homology domain-containing protein / MATH domain-containing protein (TAIR:AT5G43560.2); Has 15192 Blast hits to 9607 proteins in 677 species: Archae - 16; Bacteria - 1260; Metazoa - 5600; Fungi - 1932; Plants - 456; Viruses - 109; Other Eukaryotes - 5819 (source: NCBI BLink).6333e-066
AT1G04300.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: TRAF-like (InterPro:IPR008974), MATH (InterPro:IPR002083); BEST Arabidopsis thaliana protein match is: meprin and TRAF homology domain-containing protein / MATH domain-containing protein (TAIR:AT5G43560.2); Has 15485 Blast hits to 9800 proteins in 673 species: Archae - 16; Bacteria - 1225; Metazoa - 5601; Fungi - 1994; Plants - 616; Viruses - 101; Other Eukaryotes - 5932 (source: NCBI BLink).6333e-066
AT5G43560.1 meprin and TRAF homology domain-containing protein / MATH domain-containing protein3036e-028
AT5G43560.2 meprin and TRAF homology domain-containing protein / MATH domain-containing protein3036e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  50%
 
101  50%

Unigene MembersMember information