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Information for unigene UN05779
| FASTA Sequence |
| Unigene ID: UN05779 | Length: 1478 |
SSR | | GGTTCTGCTTTTCAGCTAACATGCTCAAGAAAGTGACTCCAAAATACAATAAAGTGAATATGACTCTCTCTCTCTATATATATATA
TGTAAGATCTCCATCCTTTATCTAGTATACCGCTCATAAAATGTAACAACGTGTGAGAGCCCAGACCACGAGACCAATGCAAATGT
GGTAGATATCCCACCTTGCCATAAGCTCAGCACTCGACGACAAGTCTCTATCTGTAACACCAACAAGAAATCTACAATCCCCAACC
GAAGGATCTAGGAAAGTAACCATGCCAAGCCCATCAAAGTCGCAGCTCTTTTCGTTTTGCATCTGCAGCTGATAGTAACTATTGAA
AACATACGAGATATTATCCTTCTCCCCAAGCTGGCTGCATGATCCCCCGTCGTTAAGCGTTGTACAATCTGCTTCACTGCAAGCAA
GCCTCAAGTGGTCTGCAACTTGGGTCATATCCTTCGCCGGGTGAGCCACACACCACCTGGAAGGAAGGTACTGAACATTCTCCGCG
TTCTTGAGCCCCCCCTCTGTTGCCTAGTCCTAAGTTGAGACGATACTTAGCCTGCCCATCGAAAGAGAAGATCCCCCAGTGCCTCT
CGAAGTTACCAGGGAGCGTGCTTTTAGCTCCTTCGTCAAGCAAACCGAAAAGATACACATCCTTAGGAGGCGAGCCAGGCCTGAGC
GGCGTCCCCTTGTTACTCAGCAGATGATTAACAAGCCCTTGGTTGAAAACACGCGCCGCAGTGAGGTTAGCACCCACTGCTCCATC
AGTAGGCCAACCAATCCCACCAATAACAATAGGCATTTGACGTACCCAATCTTGGCGAGAGCTGAGACAAGAGTGTCGAAGTTCCC
ATCAAAGGCATTGTAATAAACGTTAGGACCATCGAGAACAGGATGGCTACTCCCTTCAAAAAACGCAAAGTCTTATGGAAAATCAG
AGTTCTGATAGAGACTAAGGAAAGGGTAGATATTGACAACGAAAGGAGAGCCGTTGGAGCTGAGAAACGAAACAAGCTGAGTCATG
ATCTGCGTTAGGTCAGGCCTAAACGTCCCTTGGGAGGGAACGTTAGACTCATACGCATCTGCATTACAAGAAACAACCAACTTCAC
ATAGCTAGCTAGATTCGCTTTAACCAAGGACCGCTGGAGGTTAACCATAGCTGGGACAACATAGTTCTGATACGCACCGCCGTAAC
TCGTCAAGAACGGCTCGTTCCCCACTGCAACGTACCTGATGTCAGCGCCGCCTTTGCCCATGAAGCGAGAGAGGTTCTGCTGGACG
AAGAGATCGGGGTTGGAAGTGGGGAGAAGGTCGTTGGGAATGCTGATCATGACTTGGATTCCGGTTCCCATTAGAGCTCGGAGTGC
ATCTGGGTTTGTGTCGAAGAGCTTTACTTTTGTTATTTTGTTTGCTTTGAGGAGATCCACCACCGTGGAAGGTTTCATCTTGTGGA
ACGACATCGTTCCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABD65105 glycosyl hydrolase family protein [Brassica oleracea] | 1666 | 3e-183 |
| NP_193451 O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana] | 1574 | 1e-172 |
| CAB10499 glucanase like protein [Arabidopsis thaliana] | 1574 | 1e-172 |
| XP_002870120 glycosyl hydrolase family 17 protein [Arabidopsis lyrata subsp. lyrata] | 1566 | 1e-171 |
| XP_002329964 predicted protein [Populus trichocarpa] | 1284 | 6e-139 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M088 Glucan endo-1,3-beta-glucosidase 5 | 743 | 1e-077 |
| Q93Z08 Glucan endo-1,3-beta-glucosidase 6 | 724 | 2e-075 |
| Q6NKW9 Glucan endo-1,3-beta-glucosidase 8 | 714 | 3e-074 |
| Q9FGH4 Glucan endo-1,3-beta-glucosidase 9 | 686 | 5e-071 |
| Q8L868 Glucan endo-1,3-beta-glucosidase 11 | 252 | 1e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2A9F6 Glycosyl hydrolase family protein | 1666 | 2e-183 |
| O23562 Glucanase like protein | 1574 | 9e-173 |
| Q8GYS2 Putative uncharacterized protein At4g17180/dl4625w | 1574 | 9e-173 |
| B9N3V4 Predicted protein | 1284 | 4e-139 |
| B9SGA7 Glucan endo-1,3-beta-glucosidase, putative | 1246 | 1e-134 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G17180.1 glycosyl hydrolase family 17 protein | 1574 | 5e-175 |
| AT4G31140.1 glycosyl hydrolase family 17 protein | 738 | 4e-078 |
| AT1G64760.1 glycosyl hydrolase family 17 protein | 699 | 1e-073 |
| AT1G64760.2 glycosyl hydrolase family 17 protein | 699 | 1e-073 |
| AT2G19440.1 glycosyl hydrolase family 17 protein | 694 | 5e-073 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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