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Information for unigene UN05826

FASTA Sequence
Unigene ID: UN05826Length: 1015 SSR 
GGATTTTATTTGGAAAGTGTGATATATATCCTTCCACGCTTGCTCTCTCTCTCTCTGGATTGCTGTTGCTGCGAGGGAGAAGATAT
CCTCACCGAATCTCTCATTGCCGCCGGATCTTCGGATCAATCAACCACCACCATCTCGCCATTGAATTCTCACTTCATGGCACTTG
CATGCCGTGACACAGTACGCCTTATCTTCCAGAAGCTCACCGTCGCGGATCTAGCGCGTGCGAGCTGCGTTTGCAGAGTTTGGAAC
TCCGTTGCTACAGAGAACGATCTGGTGGCCTCTGCTTTCACGGCGCCATGGCGGATCAAGGAACTCGTGGGGAAACCGGTTTCAGG
CGCGTTCTGGAGAGATAACGGAATCTGGAAATTCGCCATCTCTCATCGGATCTCTCGTGGTGATAGCGTCACTAGCCTCGCCGTTA
AGTATTCCGTTCAGGTTATGGACATAAAACGACTAAACAACATGATGAGCGACCATGGGATTTACTCAAGAGACAGACTGCTTATT
CCAATAAGCAATCCCGAAATTCTCGTTAACACCACTTGCTACATTGAGGTAGACAAGTACGCCAAACGTGAAGTAGCCGTGCTTTA
CCTCGAAGGTGGACCAAAAAGACAACATTGTGCATCTGGTATGAATCATCTGTCCACACTATCAGCCCATGGAAAGCGGAGGCTAA
TTGAATCTCTAAGGAGAAGCATGCAAGTCGATGATGAAACTGCCCTGTATTACTTGGCTATCGCTGAAGGAAATCCAAGATCCGCA
TTGTCTGAGTTCTCGGCTGATCTCACGTGGGAGAGGCAAGCCGGCCTCAACTAGGCTTGGCAAAGTAAAGCTCTTGTAGCTCCACT
ATATAAGTTGTTATAAGGTGAGAGTCGAAAGGAGACTGATATAACATCGTCATTTGTGGGTTTGGTGACTCAGGTCAATTCCGAAC
CTCAGCCAAGTCCAGATATATAGTAGCTGTTTGGTACCTTAAATACTGTCTTCTTTTTTTTTGAACCAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891932 peptidoglycan-binding LysM domain-containing protein [Arabidopsis lyrata subsp. lyrata]9879e-105
NP_564673 invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana]9842e-104
XP_002512385 conserved hypothetical protein [Ricinus communis]8703e-091
XP_002284540 PREDICTED: hypothetical protein [Vitis vinifera]8221e-085
CBI36800 unnamed protein product [Vitis vinifera]8221e-085

Swiss-Prot top hits (Blast detail)Scoree value
Q9FZ32 F-box protein At1g550009849e-106

TrEMBL top hits (Blast detail)Scoree value
B9RF66 Putative uncharacterized protein8702e-091
C6THY0 Putative uncharacterized protein7904e-082
B9I7S2 F-box family protein7502e-077
B7FHF5 Putative uncharacterized protein6453e-065
D5ADF8 Putative uncharacterized protein6391e-064

Arabidopsis top hits (Blast detail)Scoree value
AT1G55000.1 peptidoglycan-binding LysM domain-containing protein9856e-107
AT1G55000.2 peptidoglycan-binding LysM domain-containing protein9856e-107
AT1G55000.3 peptidoglycan-binding LysM domain-containing protein9856e-107

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  29%
 
102  29%
 
211  14%
 
181  14%
 
201  14%

Unigene MembersMember information