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Information for unigene UN05857

FASTA Sequence
Unigene ID: UN05857Length: 1050 SSRSNP
TTTTTGTTTGTATCCTTCTTCCTCTCTCTCTCTCTCCGCCGCATTACGTCTCTCTCTCTCTCTCTCTCTCAATCTCTCAGCTTAAG
CGCAGAACCATGGCAGCGAAACAGGGAGCCGCAGCTACAACGTATTCACCCAAAATCATGGCGAGAACTCGGCCTCCTATCTTCAA
AGGCTCCGACCTCGATTGGACCCGTCCTGATGGTCGTGGATTCCACCAATGCCGACCTGCCTTACTTCAAACAGGTGCTGTGAGTG
CTGCTTCTGGTTCTGCTTATGCTGAGTTTGGGAACACCAAAGTCATTGTTTCTGTATTTGGGCCAAGGGAGAGTAAGAAAGCAACG
AGTTATAGTGATGTTGGTAGATTGGATTGCAATGTTAGCTACACTAATTTTGCTTCCCCGACCCTTGGTAGTCAGGGGACTGATCA
CAAAGAGTACTCATCAATGCTTCACAAAGCGTTGGAAGGCGTAATCATGATGGAGACGTTCCCAAAGACAACTGTTGATGTTTTTG
CGCTGGTTCTTGAATCTGGAGGCAGTGACCTCCCGGTTGTGATATCATGTGCTGGTCTTGCTCTAGCAGACGCCGGGATTATGATG
TATGACCTTATCACAGCTGTCTCAGTGTCTTGCATAGGGAAAAGCCTTATGATTGACCCGGTTACAGAAGAGGAAGGATGCGAAGA
TGGAAGCTTCATGATGACGTGCATGCCTTCTCGGGGTGAAATCACTCAGCTGACCATCACTGGTGAATGGACAACGCCTAACATTA
ACGAGGCAATGCAGCTTTGCGTGGATGCTTGTTCCAAACTTGGAGAAATCATGCGTGATTGTCTGAAACAGGCTGCCTCAGCTTCA
GATGAATGAACATACAACTCAAGAAACTATAGCTATGATTGTACCTCAGCCATTGGTATGAAACCGGTTAAGCTGTTGGGTTAGGT
AAAATTGAATTTATACTAAACCGGTGTGATGGAGTTTAAAACAGATGTACTGTGTTACGTCAAAATTTGATGGAACTAGATCTTTA
AAGAGCGCCATTTGCTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194479 3'-5'-exoribonuclease family protein [Arabidopsis thaliana]12038e-130
XP_002869560 hypothetical protein ARALYDRAFT_492045 [Arabidopsis lyrata subsp. lyrata]11922e-128
XP_002285257 PREDICTED: hypothetical protein [Vitis vinifera]9743e-103
XP_002328307 predicted protein [Populus trichocarpa]9743e-103
XP_002314284 predicted protein [Populus trichocarpa]9725e-103

Swiss-Prot top hits (Blast detail)Scoree value
O26779 Probable exosome complex exonuclease 13163e-028
Q97BZ5 Probable exosome complex exonuclease 13055e-027
A3MUP1 Probable exosome complex exonuclease 13002e-026
A9A5C9 Probable exosome complex exonuclease 12974e-026
Q8U0L9 Probable exosome complex exonuclease 12965e-026

TrEMBL top hits (Blast detail)Scoree value
A2RVK7 At4g2749012036e-130
A5BI33 Putative uncharacterized protein9742e-103
B9MZ65 Predicted protein9742e-103
B9HQC2 Predicted protein9724e-103
A9PJ38 Putative uncharacterized protein9681e-102

Arabidopsis top hits (Blast detail)Scoree value
AT4G27490.1 3' exoribonuclease family domain 1-containing protein12043e-132
AT3G61620.1 RRP41; 3'-5'-exoribonuclease/ RNA binding2661e-023
AT3G61620.2 RRP41; 3'-5'-exoribonuclease/ RNA binding2661e-023
AT3G46210.1 3' exoribonuclease family domain 1-containing protein1792e-013
AT3G46210.2 3' exoribonuclease family domain 1-containing protein1792e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
105  50%
 
61  10%
 
114  40%

Unigene MembersMember information