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Information for unigene UN05868

FASTA Sequence
Unigene ID: UN05868Length: 886  SNP
AGAAACACAAAGCAAACATAATTTTGGATCCATAAGTGGAAAATGAGGAACATTACTAAAAACCAGACCATGTTACTGCTTGTTGT
TACACTTTTAGTGGTGATTGCGTACCAAGAGGGAGAAGCCATACAATGTTCACAGATAACCATGTACTTAGCACCATGTTTGTCTT
ATGTAAAAGGTGGAGGAAACCCGCCTCCTCCGTGTTGCGCCGGGCTTAATAATCTAAAAGCCTCAGCGCCGGGGAAACCCGATAAA
CAAGCAGCTTGTCAATGCTTGAAGAGTGTAGCTAATGCTATATCCGGATTCAACGATGACAATGCCAAACAACTCCCTGGTAAATG
CGGTGTTAGTGTGGGGGTCCCTTTCTCTAAGAGCGTGGACTGTAACAGCATAAACTGAAAAGAAGGACTACCAACGGCCATGCAGC
AATAATATAAAGTGTGGAATTCAACGGCCATATCCTGAAAGAGCAAAAAGCATTATAACAAAACTGTTTGGATACTTTATACATGT
AATCATATAAATAAACTGTGGAATTCATACATCTAGACAATTTTCTCTAGTCTAAATGTTTTAAATTTTTTAAGTAGGAGTAATTA
GCCAAGTTAATTATCTTTGATTAGTACTATTAACAGAAAACAGTATAGTAGTGTATCTACTTTATAGCATGTGAACAAAAGTAAGA
CGCTTTCCGTGACAAAAAAAAAAAAAGAACAAAAGTAAGACGCTTTTATGCTTTTTTTACCACACAACCTTTCACCACAGTGTGAT
CCCCATCTCCAGTTCCTAAACAGCAAAAATAGGGGGCAAATATGTCTTTTGCTCATATATTTGGGTTAGTTAGCGAAGTTTTGTAT
TTAATTACACAGGCCCCGACATTTAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869218 predicted protein [Arabidopsis lyrata subsp. lyrata]4357e-041
NP_680758 non-specific lipid-transfer protein 11 [Arabidopsis thaliana]4268e-040
NP_001031782 non-specific lipid-transfer protein 11 [Arabidopsis thaliana]4123e-038
AEI70830 non-specific lipid-transfer protein [Helianthus annuus]2923e-024
AAV64877 non-specific lipid transfer protein [Prunus persica]2815e-023

Swiss-Prot top hits (Blast detail)Scoree value
Q2V3C1 Non-specific lipid-transfer protein 114264e-041
Q43017 Non-specific lipid-transfer protein 12785e-024
Q39950 Non-specific lipid-transfer protein2751e-023
A0AT33 Non-specific lipid-transfer protein 4 (Fragment)2704e-023
Q9M5X6 Non-specific lipid-transfer protein2704e-023

TrEMBL top hits (Blast detail)Scoree value
B6CQU3 Non-specific lipid-transfer protein2814e-023
Q5RZZ3 Non-specific lipid-transfer protein2814e-023
Q7XZE0 Non-specific lipid-transfer protein2796e-023
B5LXD4 Non-specific lipid-transfer protein2788e-023
B6CQU2 Non-specific lipid-transfer protein2788e-023

Arabidopsis top hits (Blast detail)Scoree value
AT4G33355.1 lipid binding4273e-042
AT4G33355.2 lipid binding4121e-040
AT5G59320.1 LTP3 (LIPID TRANSFER PROTEIN 3); lipid binding2562e-022
AT5G59310.1 LTP4 (LIPID TRANSFER PROTEIN 4); lipid binding2338e-020
AT2G18370.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein2132e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
108  35%
 
122  9%
 
67  30%
 
81  4%
 
95  22%

Unigene MembersMember information