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Information for unigene UN05872
| FASTA Sequence |
| Unigene ID: UN05872 | Length: 1070 |
SSR | | GGCTTGAGAATGCTATTGAAGCACTTCAAGAGACTATGCTTCAGGTTTCTTCTGTTGTGGTTAGGTTACGGAGGGAGTCTCTTGGA
GTATCTGTGCTTAGCAAGAATCATGTTCCTACCAAAGGGGCGTATTACCCTGCTGTAGAGAAGGCTTTGGAGATTATAAAGCAGAA
GAGTTCGTCTCTCAGCAAGGTCGTGCTTGCTCGCAACAGCAGAGTTATTACAGATACTGACATTGATCCCATTGCTTGGCTTGCAC
AGTTCAGAGTGAAGGACATGATGCATATCAGTTCTGTCTTCAACCACCAGGTGCACCAGCTTTTATCGGTAACACGCCTGGGAGGC
TTTTCCAGAGGAACCAGTTAGGTGTCTGCAGTGAAGCTTTGGCTGCAACTAGGCCTCGAGCCGCTTCAACATCTCGTGATATGGAG
ATAGAGCGTGACTTACTAACCAGCCCCAAAGACGACCTTGAGTTCTCTATTGTCCGAGAGAATATCAGAGAAAAGTTAAACTCTAT
ATGTGACAAGGTAGTTGTTAAGCCCCAAAAAACTGTGAGGAAGCTTGCAAGAGTGCAACACCTGTATTCTCAATTAGCCGGGAGGC
TTAGGAGGGAAGATGATGAGTTTGACATCTTGGCTGCTCTGCATCCAACTCCAGCTGTTTGTGGGCTTCCAGCAGAAGAAGCTAGG
CTTTTGATTAAGGAAATAGAATCATTTGATAGAGGAATGTACGCTGGACCTATTGGTTTCTTTGGTGGAGAGGAGAGTGAGTTTGC
AGTTGGTATCAGATCAGCTCTAGTGGAGAAGGGTCTTGGGGCATTGATCTATGCGGGGACAGGGATAGTAGCTGGAAGCAACCCAA
CCTCAGAGTGGAATGAGCTTGATCTAAAGATATCACAGTTCACCAAGTCAATTGAATCTGAGGCAACAACAACAACAACTCTGCAG
CCAATTAATTGAAGAAGAGTAACAACATTTGTTTATCCTTGTAGTATATGTGGAAAGGGGTTACAATAGAGAATCAGTGTGTATTT
TGTCTACGTTGTAAATAGAAATAATATTCGTTGAAAGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33994 unnamed protein product [Thellungiella halophila] | 1096 | 2e-117 |
| NP_565090 Isochorismate synthase 1 [Arabidopsis thaliana] | 1073 | 1e-114 |
| AAD55272 Identical to gb|AF078080 isochorismate synthase from Arabidopsis thaliana. ESTs gb|R90272, gb|AI100274 and gb|T42189 come from this gene | 1073 | 1e-114 |
| XP_002887554 hypothetical protein ARALYDRAFT_476608 [Arabidopsis lyrata subsp. lyrata] | 1072 | 1e-114 |
| AAC97926 isochorismate synthase [Arabidopsis thaliana] | 1069 | 3e-114 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S7H8 Isochorismate synthase 1, chloroplastic | 1073 | 4e-116 |
| Q9M9V6 Isochorismate synthase 2, chloroplastic | 986 | 6e-106 |
| Q9ZPC0 Isochorismate synthase, chloroplastic | 747 | 3e-078 |
| P23973 Menaquinone-specific isochorismate synthase | 333 | 3e-030 |
| P44613 Menaquinone-specific isochorismate synthase | 321 | 7e-029 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| D1KKB2 Isochorismate synthase | 837 | 2e-087 |
| D1GI62 Isochorismate synthase | 835 | 3e-087 |
| D1KKB1 Isochorismate synthase | 835 | 3e-087 |
| B9I302 Isochorismate synthase | 827 | 2e-086 |
| D1GI61 Isochorismate synthase | 825 | 4e-086 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G74710.1 isochorismate synthase 1 (ICS1) / isochorismate mutase | 1073 | 4e-117 |
| AT1G74710.2 isochorismate synthase 1 (ICS1) / isochorismate mutase | 1026 | 1e-111 |
| AT1G18870.1 ICS2 (ISOCHORISMATE SYNTHASE 2); isochorismate synthase | 986 | 5e-107 |
| AT1G18870.2 ICS2 (ISOCHORISMATE SYNTHASE 2); isochorismate synthase | 986 | 5e-107 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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