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Information for unigene UN05894

FASTA Sequence
Unigene ID: UN05894Length: 1049 SSR 
GGCCTCACGCAAACACACACACACATCGCCGCAGGGCCATTTCCATCTCTCTCTCTCGCAACTCTCAACTTCGAAACAATGGCTGA
ACGTGGCGGAGAACGAGGCGCCGAGCGAGGAGGAGACCGCGGAGGTTTCGGACGAGGCTTCGGAGGAGGCCGTGGCGACAGAGGCG
GCCGCGGAGGTCCTCGTGGCCGTGGAGGCAGACGCGGAGGCCGTCCCGCCGAGGAGGAGAAGTGGACCCCAGTGACCAAGCTCGGG
CGTCTCGTGAAAGACGGAAAGATCCAGAAGCTCGAGCAGATCTACCTCCACTCCCTCCCCGTCAAGGAGTACCAGATCATCGACCT
CCTCGTGGGTCCCACTTTGAAAGACGAGGTGATGAAGATCATGCCGGTCCAGAAACAGACCAGAGCCGGTCAGAGGACGAGGTTCA
AGGCCTTTGTCGTTGTCGGAGACACGAACGGACACGTCGGATTGGGAGTGAAGTGCTCCAAGGAGGTGGCCACTGCTATTAGAGGT
GGGATCATACTTGCGAAGCTGTCTGTGATTCCTGTGAGGAGAGGGTACTGGGGGAACAAGATTGGGAAGCCTCATACGGTTCCTTG
TAAGGTTACGGGGAAGTGTGGGTCCGTTACGGTGAGGATGGTGCCTGCTCCTAGAGGTGCTGAGATTGTGGCTGCTAGGGTTCCTA
AGAAGGTGCTTCAGTTCGCTGGGATTGATGACGTGTTCACTTCTTCCAGGGGGTCTACCAAGACTCTTGGAAACTTCGTAAAGGCT
ACATTTGATTGCCTCCGGAAGACTTATGGATTCTTGACACCAGAGTTCTGGAAAGAGACGAGCTTTAAGAAATCGCCATACCAAGA
GTACACTGATTTGCTCGCCAGTAAGGGAACTACGACCAAAGTCATCACCGAGGTCGAAGACCAAGCCTCCTAAACAATGTCTACCC
TTGTTTTGTTTTTGGATCATCATCTTTTCTTGAGTTTATTTTGTTCGAACCTTTAGTATATGTTTGTTGCTGGATTGCATCTTTTA
TATTCCATCATCTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881803 40S ribosomal protein S2 [Arabidopsis lyrata subsp. lyrata]12915e-140
AEM36341 At1g58380 [Arabidopsis thaliana]12826e-139
NP_564737 40S ribosomal protein S2-2 [Arabidopsis thaliana]12782e-138
XP_002886684 hypothetical protein ARALYDRAFT_475376 [Arabidopsis lyrata subsp. lyrata]12782e-138
NP_176134 40S ribosomal protein S2-1 [Arabidopsis thaliana]12772e-138

Swiss-Prot top hits (Blast detail)Scoree value
Q93VB8 40S ribosomal protein S2-212787e-140
Q8L8Y0 40S ribosomal protein S2-112771e-139
P49688 40S ribosomal protein S2-312715e-139
Q9SCM3 40S ribosomal protein S2-412052e-131
P15880 40S ribosomal protein S29902e-106

TrEMBL top hits (Blast detail)Scoree value
B5BRD8 40S ribosomal protein S212781e-138
Q8LDY5 40S ribosomal protein S212645e-137
B9II72 Predicted protein11741e-126
A9PDI4 Predicted protein11633e-125
A9RHM6 Predicted protein11491e-123

Arabidopsis top hits (Blast detail)Scoree value
AT1G58983.1 40S ribosomal protein S2, putative12787e-141
AT1G59359.1 40S ribosomal protein S2 (RPS2B)12787e-141
AT1G58684.1 40S ribosomal protein S2, putative12787e-141
AT1G58380.1 XW6; structural constituent of ribosome12779e-141
AT2G41840.1 40S ribosomal protein S2 (RPS2C)12714e-140

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  33%
 
72  67%

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