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Information for unigene UN05911
| FASTA Sequence |
| Unigene ID: UN05911 | Length: 1052 |
SSR | | GGATTCAAGAATCGTCCTTTACTTTCAGTGCCTCTCTCACTTTGCCTATCTCCTACTCATCTGTTTCTTCGCCTTCTCTCAGCCTT
TCTTTCTTGTTCTATCAGAAATAGTGAATGGAGCTGTGGACAGAAGCTAGAGCCTTAAAGGCAAGTCTAAGAGGAGAAGCAATAAA
GCATCAGGTGATTGTGTCTGAGGAACTAAGCCGAACTTCTTCTGCTGAAGATTTCTCCGTTGAGTGTTTCCTCGATTTCTCAGAAG
AAGGTCAAGAACAAGAAGAAGAAGAAGGACTTGTATCTGTTTGTTCTTCACAAGAAGAACAAGATTGTCGTATCTTTAGTTCACAA
CCTCGCATCTTTGATCAACTTCCTTCCTTGCCGGATGAAGATGTGGAAGAGCTTGAATGGGTATCTCGTGTTGTGGATGATTGTTC
TTCACCAGAAGTCTCACTTCTCTTCACACAAACCCACAAAACCAAACCAAGCTTCTCATCTTCAATACCGGTTAAACCAAGAACCA
AACGGTCTCGGAACAGCTTAAGCGGTAACCGGGTGTGGCCACTAGTTTCAATCAACCAACATGCAGCAGGAGAGCAGTGTAAGAAG
AAGAAACTAGAAACGGCGCTTGTGTTTCAAAGAAGATGCAGCCATTGTGGCACAAATACCACACCTCAGTGGAGAACCGGTCCGGC
CGGTCCAAAAACCTTATGCAATGCATGTGGAGTCCGGTTTAAGTCCGGTAGGCTCTGCCCGGAGTACAGACCGGCGGATAGTCCGA
CGTTCTCAAATGAGATCCACTCAAATCTTCATAGGAAGGTTATGGAACTGAGAAAGAGTAAAGAGTTCGGTGAAGAAAGAGGAGAA
GCTACTACTAAATCAGACCAAGTCAAATTTGGCAGCTAAGTGGTAGAGAAGACTTAGGTAAAATGAAAATCTACTTGTTTTAACAT
TATCTCTAGTTTTGTAAACTTTAACAACTTTGTCCAAAACATATTAAGTTGTTCTGGAATTAGTGTCTGAAAAGTGTTGTTCTCTC
TATAAACAAGATTATGTATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33857 unnamed protein product [Thellungiella halophila] | 1214 | 5e-131 |
| NP_195194 GATA transcription factor 3 [Arabidopsis thaliana] | 1104 | 3e-118 |
| XP_002869130 hypothetical protein ARALYDRAFT_491187 [Arabidopsis lyrata subsp. lyrata] | 1101 | 6e-118 |
| AAM20641 GATA transcription factor 3 [Arabidopsis thaliana] | 1100 | 7e-118 |
| CBI16598 unnamed protein product [Vitis vinifera] | 390 | 2e-035 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L4M6 GATA transcription factor 3 | 1104 | 1e-119 |
| O49743 GATA transcription factor 4 | 364 | 7e-034 |
| Q8LAU9 GATA transcription factor 1 | 339 | 6e-031 |
| Q9FH57 GATA transcription factor 5 | 309 | 2e-027 |
| O82632 GATA transcription factor 9 | 307 | 3e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DGI2 AT4G34680 protein | 1104 | 2e-118 |
| Q0WTQ5 GATA transcription factor 1 | 339 | 9e-030 |
| Q2HIT4 At3g24050 | 339 | 9e-030 |
| C6TAJ4 Putative uncharacterized protein | 330 | 1e-028 |
| B9RWP4 GATA transcription factor, putative | 328 | 2e-028 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G34680.1 GATA transcription factor 3, putative (GATA-3) | 1104 | 1e-120 |
| AT4G34680.2 GATA transcription factor 3, putative (GATA-3) | 1104 | 1e-120 |
| AT3G60530.1 zinc finger (GATA type) family protein | 364 | 6e-035 |
| AT3G24050.1 GATA transcription factor 1 (GATA-1) | 339 | 5e-032 |
| AT5G66320.1 zinc finger (GATA type) family protein | 309 | 2e-028 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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