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Information for unigene UN05962

FASTA Sequence
Unigene ID: UN05962Length: 1244 SSR 
AAACAGAAGGTATAAAGAGGAAACATATAGATTTTTATTGTCATTATTACATTGTCATCGCCATGAAAAAGGCTTCTCTATAATAG
CTTAAAAGAAGATATGATTCTTGTTGTGTTTGCTTTCTAAAAAGTATAAAATTTTCTGATATTCACATTTTTAAGTATAAAAAGGT
TATGCAATAAAAACTGTTCTTGGACGAAAGAGAATAAAAATTTTATTTGTCTAACCTCTTTTGATTATGAGTCTCAGTTTGTCTAG
TGCCAAGCGATTCAATGTCACAAGCTTCTCAGAGTCTCTTCATAGTGCCAAAACTGTTCTTCTTCTTTTAGTTTTATCTTATTATA
CTGTTATAAGTGGAGTCTGACTAGTCACCACTATGATGTGAACTTTGTGTTTGCCTCTGGCTTGCACCTTGAGTCTCTTCCAGCTT
CTGGCTCTCCATATGAGTTTGATGGTGGATTTGAACCTCGTTTTGATTCTGAGACTGAGTGTGGCTCTTGGTCTTGATTACCTGAC
TCTTGTACATGTATCTCCTACGAAGTTTAATGGCTGTGCGTACGCATCTCCTCACGCTAAACACAAGAACTTATCGTTGAAAATCT
GTATCATGTCATCAATGGAGCGAGTTTCTTTCATGATCTTATGACGATTCATAATCAAAATCGCCGCCACACAAAAGACGGGAAGA
GCATCATCCCCTTTCCTGATGGACGAGACTACACAAGGGGCATGTGTGGTTGTTCTACCGCTCCTTGACCAGAGACTTCTTGTCAA
TCCACAGAAGTGATATGCGGAAGAGGATGATGATGATGATGCTGACTTCATCCCACTCTCCTCAGAGAGCGGACCAGTGGTCTTTG
GCAACGGACCGCTCTTCGGCAGCAGACCGCTCATAGACAACAAACCGCTGCTCTTTGAAATCGGTCCGCTCTTTGAAGTTGATGGT
TCTCTCTTCATACTATCATATATGGTTTCCTCACTCACTTCAGATTTGGTTTTGCTTGGAGTCTGAATCACCAGAGGCTCCACGCA
ATCATTCTCCAGAGTTTCAGCAACAGATTCATCGTAATCAGCTGCCCACATCATCTCCCACATTCTGAGAGCTTCATTGAAAGACA
GTTCTCGCCGGAAGAGTACTAAAAGCATACGGAAGGCAAAGTGAAGACTCTCAGCACCAATACGCGTCAAGTGAGAGAATATATAT
TTATCTGTGAGTTGGAGTATGTGCCACAGTGATTGCAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881907 RabGAP/TBC domain-containing protein [Arabidopsis lyrata subsp. lyrata]9361e-098
NP_181877 RAB GTPase activator protein [Arabidopsis thaliana]9314e-098
NP_001118516 RAB GTPase activator protein [Arabidopsis thaliana]9314e-098
NP_001118517 RAB GTPase activator protein [Arabidopsis thaliana]9314e-098
NP_001189743 RAB GTPase activator protein [Arabidopsis thaliana]9314e-098

Swiss-Prot top hits (Blast detail)Scoree value
P09379 GTPase-activating protein GYP71246e-006

TrEMBL top hits (Blast detail)Scoree value
B3H4N2 Uncharacterized protein At2g43490.19313e-098
B3H5J0 Uncharacterized protein At2g43490.49313e-098
B6EUB2 Putative uncharacterized protein At2g43490.59313e-098
O22863 Putative uncharacterized protein At2g434909099e-096
Q9M1B2 Putative uncharacterized protein T16L24.1104707e-045

Arabidopsis top hits (Blast detail)Scoree value
AT2G43490.1 RAB GTPase activator9311e-100
AT2G43490.2 RAB GTPase activator9311e-100
AT2G43490.3 RAB GTPase activator9311e-100
AT2G43490.4 RAB GTPase activator9311e-100
AT2G43490.5 RAB GTPase activator9311e-100

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  67%
 
111  33%

Unigene MembersMember information