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Information for unigene UN05988
| FASTA Sequence |
| Unigene ID: UN05988 | Length: 1445 |
SSR | | CTCCTTTTTTTTTAAATTCTTGACAGATAGCTGGAATCCATCCAGAGAATTGCAAGGTGCTGAAAGCAGATTCGTCTACAAATTAC
GCTCTCCGTCCAGAATTGCTTCAAGAAGCCGTTTCTAAGGATCTTGAAGCTGGATCGATTCCATTCTTCTTATGTGGCAATGTAAG
CACTAGCTAACCCGTTACTTACTTACTCTCCGAAGCATGTTCTCTCAAAAAGATTCTTTTATTTATTTGCAGGTTGGAACAACTTC
TTCAACAGCAGTTGATCCATTAGCTGCACTAGGAAAGATAGCAAAGGTTATTTATTTCACATTTCCAACAAGCTTAGTAGAGAACT
TAGCAGCATAAAACTGATGCTAATTTTCTTGACTGCATTCTCAGAGCAACGAGATATGGTTTCACGTGGATGCTGCGTATGCTGGA
AGTGCGTGTATATGTCCAGAGTATCGACAGTACATCGACGGAGTAGAAACTGCAGACTCTTTTAACATGAACGCTCACAAATGGTT
CCTCACTAATTTTGATTGTTCCCTACTTTGGGTGAAGGTACACAGATATGCCCTTCATTTAGTCAACTTTCTTTCTCCTCAAGTAT
TGAAAAAAAATAAACATGTTAATATGTTGATAAAACAGGACCAGTATGCTCTCACTGAAGCTCTGTCAACAAATCCTGAATATCTC
AAAAACAAGGTAAGAATGAGTTTGATTTCTTAATTCAAATCTTTCTGGATCATACTAGTCTTATTATCCACTTTTTTGGCAGGCCT
CTCAAGCAAACTTGGTTGTTGATTACAAAGATTGGCAGATCCCTCTCGGACGAAGATTCAGGTTATTTGAAGTTCTGCCGGAACAT
CTGCATATATTTGCAATATACTGAGGTTGTCTTTGTGTGTATTTAAACAGATCATTGAAACTATGGATGGTTTTAAGGCTCTATGG
AGCTGAGACTTTGAAGAACTATATTAGAAACCATATCAAGCTGGCTAAAGATCTCGAACAACTTGTCTCTCAAGATCCTAACTTTG
AGGTAAAGTGTAAAATTAATGCTCAAAAACATTCTGGAAAAGGATATATGACCGTTTTATTCTTTTTCTTTTTGCAGGTTGTGACT
CCTAGGATATTTTCTCTCGTCTGTTTCCGTATCGTACCTGTGGATAACGATGAAAAGAAGTGTAATGACAGAAACAGAAACCTCCT
AGACGCAGTGAACTCTTCTGGGAAACTGTTCCTTTCTCACACTGTAAGTACCACTGACATCTCTTTCTCTCTCTCTCTCTCTTTCT
TGTATATATATATTGATTTGCGTGGCAAACAGGCTTTGTCAGGAAAAATCGTACTACGTTGCGCCATAGGAGCGCCACTGACTGAG
GAGAAGCATGTGAAGGAGGCATGGAAGGTTATCCAGGAAGAAGCATCATACTTGCTTCGCAAGTAAAAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_849999 Tyrosine decarboxylase 1 [Arabidopsis thaliana] | 315 | 1e-026 |
| AAD21754 putative tyrosine decarboxylase [Arabidopsis thaliana] | 315 | 1e-026 |
| XP_002884194 hypothetical protein ARALYDRAFT_900384 [Arabidopsis lyrata subsp. lyrata] | 314 | 2e-026 |
| XP_002269446 PREDICTED: similar to tyrosine decarboxylase, putative [Vitis vinifera] | 300 | 7e-025 |
| CBI37202 unnamed protein product [Vitis vinifera] | 300 | 7e-025 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8RY79 Tyrosine decarboxylase 1 | 315 | 5e-028 |
| Q7XHL3 Tyrosine decarboxylase 1 | 291 | 3e-025 |
| Q06086 Tyrosine decarboxylase 2 | 253 | 8e-021 |
| Q06087 Tyrosine decarboxylase 3 | 252 | 1e-020 |
| Q06088 Tyrosine decarboxylase 4 | 252 | 1e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GRB9 Predicted protein | 296 | 1e-024 |
| B9FWY7 Putative uncharacterized protein | 291 | 5e-024 |
| Q0D6V0 Os07g0437500 protein | 291 | 5e-024 |
| C0LIF0 Tryptophan decarboxylase | 289 | 9e-024 |
| C5X511 Putative uncharacterized protein Sb02g010470 | 286 | 2e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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