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Information for unigene UN06001
| FASTA Sequence |
| Unigene ID: UN06001 | Length: 1283 |
SSR | | CGATAACCAAATCACATTTCATTAAGGACTGTTGTTGAGTTTTACAACTTGATCTCCTAGAAAGATAAAAACACAAAAGGACAAAG
GCATACACATGTTTTTTTTTGAGGTACAAGGAATGAAAAACAATCCTTGCAAAATCTCAAACGACCCTTTTTCGAAGAGAAAGGAA
GATCTCACAAAACACTATCCTTCTTTCTATCTTCCTCTCTCTCGCTGTGTATATATAAATTTTGAAAAGCATTGAACTTGGGAGTA
GAAAGAGGATGAGCACTCTCACTCTTCTTCCAAATTTTCTGAAGAGTCATTCACTCTATTCACACCTTTCTTCAACCCTTCTATAT
TCACCCGAAAAAAGCAAAATGAAAAAAAAAAGACCAAACCTTTAAACCTTCTTGACGAAACAGAGTGAAAAACCAACACTTTCTTC
TTCTTCTTCTCACGACCTATACACACTGTGATTCCTTTTGAAGTAGTTGTAGTCTGGTCAAGCCAAAGTGTACCTCGAAACCGCGA
CGTTTGCGGGAGATGTTGAGTGAATGTAGACGAACTCTAGGGACTTTCCGGATTGCAATGAGTGCATGGGAAGGTAAACCGAACGA
GTTTCCTGATCTAGAGAGTCCCCAGATTGGTCCGTAGAGATTCTTGATCGAAAGGTTGAGACTTTTCAGAGCTCTAGGTGATTTGT
TAATCACAGTTGTTGAGTATCTGTAGTAAGTCCTTCCCTTTGACACCCACGAACCTGTCATCTTCTGAACTATAGCCACTGGACCA
GAAGCTCGGACCGGGGAAGTAACTCTCGGTTTACGAATAGGCATTGGTCTTCGAACAACAACAGGAGCAGGAACCACTGGAAGAAG
CTGGCTGTAACCAGAATGGCCACTGCTGAGACGAGCAAGAACACCAAGAAGTGGTGCATTGTTGTAAGTAGCAGGCTCAGTCTGCT
CGTAGTTGTCTCTCCTGTCAGCGAAATTGTCGTAAGCATCGGGACCGCCAACAATAGCACCAGTGAGGAGGTTGGGATCACTGCCT
TTGCGGCTGAACCAGGTGGCGTAACCACCACGGCAGGTGACAAAAGAGCGGTCAACCTTGTAAGAGACGATGGAGGAGCCACGGTG
GTGAACTCTCTGAGGGAAATTGTTACCGTAACCAACCATATAGCTAGTAGCTCTTGGGTTGTCTCCAAGGATGTAATCAACCTGTG
ATTTAGCGAAGGAAAGAAGCTGCGAAGGAGCAACGTTGCCAGCAGAGCATCTCAAGTAGCTTCGAGAGGAAGTTAGGTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176621 endoglucanase 6 [Arabidopsis thaliana] | 1149 | 2e-123 |
| AAN31840 putative endo-beta-1,4-glucanase [Arabidopsis thaliana] | 1149 | 2e-123 |
| XP_002887890 hypothetical protein ARALYDRAFT_892975 [Arabidopsis lyrata subsp. lyrata] | 1146 | 5e-123 |
| ABK96199 unknown [Populus trichocarpa] | 917 | 2e-096 |
| XP_002303645 glycosyl hydrolase family 9 [Populus trichocarpa] | 917 | 2e-096 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PIJ6 Putative uncharacterized protein | 917 | 1e-096 |
| B9GXH8 Glycosyl hydrolase family 9 | 917 | 1e-096 |
| B9GL66 Predicted protein | 916 | 1e-096 |
| Q25B23 Endo-beta-1,4-glucanase | 901 | 8e-095 |
| Q25B24 Endo-beta-1,4-glucanase | 901 | 8e-095 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G64390.1 AtGH9C2 (Arabidopsis thaliana glycosyl hydrolase 9C2); carbohydrate binding / catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | 1149 | 8e-126 |
| AT4G11050.1 AtGH9C3 (Arabidopsis thaliana glycosyl hydrolase 9C3); carbohydrate binding / catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | 865 | 7e-093 |
| AT1G48930.1 AtGH9C1 (Arabidopsis thaliana glycosyl hydrolase 9C1); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | 469 | 6e-047 |
| AT2G32990.1 AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | 408 | 7e-040 |
| AT2G44570.1 AtGH9B12 (Arabidopsis thaliana glycosyl hydrolase 9B12); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds | 370 | 2e-035 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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