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Information for unigene UN06002

FASTA Sequence
Unigene ID: UN06002Length: 806 SSR 
GGGATCTATTTATTCATCGGTTTCTCTCGCCACCACCACACCGATCATGTCCACCGCTCAAACGTCATCCCTCCGCATGATTTGAT
CTCTCCATCTCTCTCTCTCACAAAGATGCATGCGTTTACTTAGATTACGGAAACTGTTTGATCTGTGCCAAAAAAAAAAGAATCAA
TCTTTTATATTATCTCTCTCATGTCATCATCGACTAGCGCTCAAGGAGAAGAGATAATGGATCTTGATCTGAACCAAGAACCATCT
CCCGGTTCAGATTCTCCACCCGGTTTAATCACCGAGATTTCACCGTGGTTAAACGAGCTCGAATCTGCTCACGAGCGGATCGAAGA
ACGCTTGAGACAGCTCGAATCTATCGTCTCAAGAATCAGGGAACGAGCAACGGTCACAACAACACCACCTGCCGCCTTGGTTCTTC
CTCCTCCTCCAAGAGACTCAACGGCAGGCGTTATACACGAGCGTTCCAGAGAGAGACTGGTGGAGAGCGGCGACGACGACAGCAAG
ACGTATCTGATAGCAAAGGCGCTGAACATGGAGAGAACGAGCTCTGTCCCGGGCGGTTACTTCGACTGCAACATATGTCTTGAGAA
AGCCGAAGATCCGATCTTGACTTGCTGCGGTCACTTGTTCTGCTGGGGATGCTTCTACCAGCTGCCTTTCATTTACCTCAACATCA
AAGAGTGTCCCGTCTGCGACGGAGAAGTGACTGACACCGAGTGATTCCTATATACGTAACGGAGATGGAGATGACGTGGTGGTGAT
AGTAAAGCCAGCGTGAGAGTGTGTATCAGCTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880109 protein binding protein [Arabidopsis lyrata subsp. lyrata]7295e-075
NP_181969 RING/U-box domain-containing protein [Arabidopsis thaliana]7143e-073
AAC16087 unknown protein [Arabidopsis thaliana]6982e-071
ACY30433 hypothetical protein [Nicotiana tabacum]2922e-024
XP_002330855 predicted protein [Populus trichocarpa]2734e-022

Swiss-Prot top hits (Blast detail)Scoree value
Q8GUK7 E3 ubiquitin-protein ligase RMA31612e-010
P93030 E3 ubiquitin-protein ligase RMA21423e-008
Q6R567 E3 ubiquitin-protein ligase RMA1H11413e-008
Q5ZIR9 RING finger protein 1851413e-008
Q96GF1 RING finger protein 1851413e-008

TrEMBL top hits (Blast detail)Scoree value
Q6NLR3 At2g444107142e-073
O64875 Putative uncharacterized protein At2g444106981e-071
D0VEA4 Putative uncharacterized protein (Fragment)2922e-024
B9N6I1 Predicted protein2733e-022
B9HPS3 Predicted protein2652e-021

Arabidopsis top hits (Blast detail)Scoree value
AT2G44410.1 protein binding / zinc ion binding7141e-075
AT3G58030.1 zinc finger (C3HC4-type RING finger) family protein2212e-018
AT3G58030.2 zinc finger (C3HC4-type RING finger) family protein2212e-018
AT3G58030.3 zinc finger (C3HC4-type RING finger) family protein2212e-018
AT2G42030.1 zinc finger (C3HC4-type RING finger) family protein1763e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information