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Information for unigene UN06054
| FASTA Sequence |
| Unigene ID: UN06054 | Length: 966 |
SSR | | GGGCTCATTTCAGATTTAAACCCCAGCGAATTTGTGGAGTTGAGAGAGAGAGAGAGAAAAGTCGAGTCGTCAATGGCGTCTGCTCT
TTGTAGAACCGCAAGCCGTCTTCGCGCCGTTCAGATTTTTCGTCGAATTCGCGCCTCGAGCGATCTACTGTCTTCGTCTTCTCCGC
CTCCGGCGTGCATCTCCGATCATGGAGATTTCTCTCTTCCTCGATCGTTTTTCTCACTTAGCGGTGGAATCGAACGGTTGGAGATG
GATGGGAGATGTTTGATGAGCACGTCTGCTTCTGGTACAACCTCTAAGCCTAGCTCTGGTGATACGGAGACGAAATCTTCCGGCGA
AAACGAGAAATCTGGAGGATCGGAGGGTTCAGATGGCGGTGGTTCCGATCAGAAAAGCGACCGTGCATCTGGGAAACACGCTCGTG
GAGCGCCGGTTTCGTGGATGAGCTTCTTCTTGCTGTTTGCTACTGGAGCTGGATTGGTCTACTATTATGACCGGGAAAAGAAACGT
CATATAGAAGATATAAATACCAATTCTAAAGCCGTCAAGGAGGGACCATCAGCTGGAAAGGCGGCTATAGGAGGACCATTCAGCCT
TATAAGAGATGATGGGAAGCGTATTACGGAGAAAGACTTGATGGGGAAATGGACCATCTTATACTTTGGGTTCACTCATTGTCCTG
ATATCTGTCCTGACGAGCTTATTAAGCTAGCTGCTGCCATTGACAAAATAAAGGAAAAGTCGGGAGTGGATGTGGTGCCGGTGTTT
ATCTCTGCGGATCCTGAAAGAGACGCAGTTCAACAAGTACATGAATATGTCAAAGAGTTTCATCCGAAATTGATCGGGTTAACCGG
GACCCCTGAAGAAATCAAATCGGTGGCACGTTCGTACCGGGTTTACTACATGAGACGAGAGAGATCAGACTATCTCGTGATCACTC
CATGTCATGTACTGATGAGC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002882593 electron transport SCO1/SenC family protein [Arabidopsis lyrata subsp. lyrata] | 1262 | 1e-136 |
| NP_566339 electron transport SCO1/SenC-like protein [Arabidopsis thaliana] | 1256 | 5e-136 |
| AAF07830 putative SCO1 protein [Arabidopsis thaliana] | 1014 | 6e-108 |
| XP_002263427 PREDICTED: hypothetical protein [Vitis vinifera] | 762 | 1e-078 |
| XP_002323592 predicted protein [Populus trichocarpa] | 735 | 1e-075 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5SUC9 Protein SCO1 homolog, mitochondrial | 413 | 1e-039 |
| O75880 Protein SCO1 homolog, mitochondrial | 409 | 4e-039 |
| A1A4J8 Protein SCO1 homolog, mitochondrial | 394 | 2e-037 |
| O42899 Protein sco1 | 378 | 2e-035 |
| P23833 Protein SCO1, mitochondrial | 357 | 4e-033 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VYP0 Putative SCO1 protein | 1256 | 4e-136 |
| Q9SR94 Putative SCO1 protein | 1014 | 4e-108 |
| B9IGB6 Predicted protein | 735 | 9e-076 |
| C5XVE3 Putative uncharacterized protein Sb04g004150 | 710 | 7e-073 |
| B4F7T4 Putative uncharacterized protein | 702 | 6e-072 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G08950.1 electron transport SCO1/SenC family protein | 1256 | 2e-138 |
| AT4G39740.1 electron transport SCO1/SenC family protein | 323 | 3e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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