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Information for unigene UN06064

FASTA Sequence
Unigene ID: UN06064Length: 1285  SNP
TCTCCTATCATTTTCAGCTAAGCTCTCGCTTTATCTCTCTTAATCTATCTACTGATGAAGATCAGGTGCGACGTCTGCGATAAAGA
AGAAGCCTCGGTGTTCTGCACCGCCGACGAAGCGTCTCTGTGCGACGGCTGCGATCACCAAGTCCACCACGCTAACAAACTCGCCT
CAAAACATCTCCGTTTCTCTCTCCTCTGTCCTTCTTCCTCCGAGAACTCCTCTCCTATCTGCGACATCTGTCAGGAGAAGAAAGCT
GTGTTGTTTTGTCAACAAGATAGGGCTATTTTATGCGCAGACTGTGATTCATCGATCCACTCGGCCAACGAACACACCAAGAAACA
CGATAGGTTTCTTCTCACAGGGGTTAAGCTATCTCCAACCTCCTCTGTTTACAAACCAACTTCAGACTCTCCTTTAAATAGTCAAG
ATTGCTCTGTCCCTGCTCTCTCAAAGAAACCTATCTCAGCTCCTCAGAGTCAGATCAAGAGCTCCAAGATCCAACCCTCTAAGATC
AGTAGCGATGTAGGCATGAATCAGTGGGGATCCACAAGCACGATTTCAGAGTACTTGATCGATACGTTACCTGGTTGGCACGTTGA
GGATTTTCTTGATTCCTCACTTCCTCCTTTTGGTTTCTCTAAGAGTGGTGATGATGATGGAGTGTTACCATATATGGAAGCAAAAG
ATGACAGCACTAAGAGAAACAACAACAATACAGTGTCACTTCCATCTAAGAATATGGGGATTTGGGTCCCTCAGATTCCACAAACT
CTTCCTTCTTCATACACAAACCAGTACTTTTCTCAGGACAACAATATTCAGTGTGGGATGTACAACAACAAAGAAGCATCACATGG
AGTAGAGACTTATGCTCCAATACAAAACATGAAACAACAAGGACAGAACAAGAGATGGTATGATGATGGTGGCTTCACTGTCCCAC
AGATAACTACTACTTTTACTCATCCTCCTCCTATTACTTCTAATAAAAGGTCCAGATCCTTCTGGTAATCTACCTGGTGTTTTCTG
TTTTGTTTGTTTGTTGGCCTTTTGGTCTTTCTTGATTTCTCTGAACTTCGTTCTTTGTAGAACTAGGTTTACTTCTTGGTGTATTT
TGTAAATTTTGAGTGTGATTGCAAATGTTTTTTCTTATCCTCTATTGCAAGTTTTCGTGTAATAAAAGCCCCGTGACTTATATTGT
GAATCACGGCGCAAGATTTCTCCGTTTTTTGTGGAAGCAAGACTTCATTTCATAGAAAGAAATTAGTTATTTTCGATTGAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887603 zinc finger (B-box type) family protein [Arabidopsis lyrata subsp. lyrata]13203e-143
NP_177686 putative salt tolerance-like protein [Arabidopsis thaliana]13042e-141
XP_002280716 PREDICTED: hypothetical protein [Vitis vinifera]7056e-072
XP_002306904 predicted protein [Populus trichocarpa]6975e-071
XP_002302002 predicted protein [Populus trichocarpa]5632e-055

Swiss-Prot top hits (Blast detail)Scoree value
Q9LQZ7 Probable salt tolerance-like protein At1g7554013049e-143
Q96288 Salt tolerance protein3479e-032
Q9SYM2 Probable salt tolerance-like protein At1g786003316e-030
Q9SID1 Salt tolerance-like protein3173e-028
Q9SK53 Zinc finger protein CONSTANS-LIKE 31328e-007

TrEMBL top hits (Blast detail)Scoree value
B9H4I6 Predicted protein6974e-071
Q84VZ8 At1g755405657e-056
B9GRG8 Predicted protein5631e-055
B9H0W3 Predicted protein5452e-053
D3YBC1 Salt tolerance-like protein5343e-052

Arabidopsis top hits (Blast detail)Scoree value
AT1G75540.1 STH2 (SALT TOLERANCE HOMOLOG2); transcription factor/ zinc ion binding13056e-144
AT4G39070.1 zinc finger (B-box type) family protein4427e-044
AT1G06040.2 STO (SALT TOLERANCE); DNA binding / protein binding / transcription factor/ zinc ion binding3478e-033
AT1G06040.1 STO (SALT TOLERANCE); DNA binding / protein binding / transcription factor/ zinc ion binding3478e-033
AT1G78600.1 LZF1 (LIGHT-REGULATED ZINC FINGER PROTEIN 1); transcription factor/ zinc ion binding3316e-031

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
109  45%
 
214  20%
 
83  15%
 
201  5%
 
113  15%

Unigene MembersMember information