 |
Information for unigene UN06069
| FASTA Sequence |
| Unigene ID: UN06069 | Length: 1529 |
SSR | | GATAATAATGAGCATACTCACACTGCTCGTTAAAATTGCCGGACTTCTCGGCACGATCACCGTCGGCGCCAACGCAGTCTCTTACT
CTCGTTTCCGTCGCCGGAACCTCCGGAAGTTTCGCTCTCCGATCGACGAATCCAAAGAAGTTCTCGCCGATTTCACTTCCCAAGAA
CACAACGAGGGAAAGTTCTTCTTCGGATTGGCTACTGCACCTGCTCACGCGGAGGACGATCTCGACGATGCATGGATCCGGTTTGC
GAAAGAAACGCCGTGCTCGGTAGAAGATGAAGAGGATAAGAGCGCAATGAGGAAGAAGAAGAAGAAGGTTAAGCTTGCTATTGGAG
CTATTACGAAAGGGTTGGCCAAGAACACTAATGGAAAAGAAGATAACACTGTTGCCGACAGTACACCCACTAAGAATGTAGCTGCG
TGGCACAACACACCTCACGCGGAGGTCAGGCTTAAGTTTTGGTCGGATCCTGACCAAGAAGTGAAGCTAGCTAAAGATACTGGCGT
TACAGTCTTCAGGATGGGAGTTGATTGGTGTAGGATAATGCCTAAAGAGCCTACCAATGGGATTAAGGAAGCTGTTGACTATGAGG
CCCTTGAACACTATAAATGGATACTCAACAGAGTTCGTTCAAACGGGATGAAGGTGATGCTAACGCTCTTTCACCATTCATTGCCA
CCATGGGCTGCTGATTATGGGGGATGGAAAATGGAGAAGACCGTCGACTACTTTATGGACTTCACCAGGCTTGTAGTGGATTCCAT
GTTCGATTTGGTAGACTCTTGGATTACATTTAACGAACCTCATATCTTCGCCATGCTTACTTACATGGCCGGAACTTGGCCTGGTA
ACACCCCTGATTTTCTGGAGATGGCTACATCTACTCTACCAATGGGTGTATTCCACAGAGTCATGCATTGGATGGCTGTTGCTCAC
TCAAAGGCCTATGACTACATCCACGGGAAAAACTCCTTGGAAAAGCCTTTGGTAGGGGTTGCGCACCACGTCTCCATTCTACCGTA
GCGTTGATAATCATGGTCTAATGTACGCAGATGGTCTAGACAAGCCTCAAGGGAGACAGTTTGTTGACCGTGACTGGCGGTTTGGT
CATTACCAAGTGGATGGTCTCCAAGACCCGCTGAGTCGCGTTGCTCGAGCCCTTCTCATATGGCCGGTCATCATGAAAAAGAAGAT
TAGAAAAGTTAAGGTCAAGCAGACCGATGAGTCGGGGCTTGCTTTACATCCCGCGTATGCCTCTGCCTTTGACTAGAAGAAGAGGG
TAGAAACCTGAGGAAACAATTTTACTTCCTTCTGTATGATTTGCCAAAACCTTTTGGCGCAAATTCGAGACGATTCACCGTTTTGT
TTGTTACATTTAAATAAAGGCAAAACGGGACGATGTTGTAGCGTAAAATCTGCAGATGTTGTGTTGTTCTAGCCCATTTTAGTTGT
AGGTCTTGAACCTTATTTTTACTAATTTTTTTGAAACTTATAATTTTAGTCTTGTATGACTGTTTAT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882476 hypothetical protein ARALYDRAFT_477956 [Arabidopsis lyrata subsp. lyrata] | 1541 | 9e-169 |
| NP_566285 beta-glucosidase-like SFR2 [Arabidopsis thaliana] | 1537 | 3e-168 |
| NP_001118591 beta-glucosidase-like SFR2 [Arabidopsis thaliana] | 1537 | 3e-168 |
| CAD36513 mutant putative beta-glycosidase [Arabidopsis thaliana] | 1530 | 2e-167 |
| AAL31914 AT3g06510/F5E6_16 [Arabidopsis thaliana] | 1528 | 3e-167 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93Y07 Beta-glucosidase-like SFR2, chloroplastic | 1542 | 3e-170 |
| Q8L6H7 Beta-glucosidase-like SFR2, chloroplastic | 817 | 3e-086 |
| P10482 Beta-glucosidase A | 230 | 4e-018 |
| P26208 Beta-glucosidase A | 214 | 3e-016 |
| Q03506 Beta-glucosidase | 209 | 1e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HX58 Predicted protein (Fragment) | 1153 | 6e-124 |
| A9RZ28 Predicted protein | 939 | 4e-099 |
| Q1M319 Putative beta-glycosidase | 879 | 4e-092 |
| Q1M320 Putative beta-glycosidase | 869 | 5e-091 |
| C3SAA1 Beta-glycosidase | 851 | 6e-089 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G06510.1 SFR2 (SENSITIVE TO FREEZING 2); beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds | 1542 | 3e-171 |
| AT3G06510.2 SFR2 (SENSITIVE TO FREEZING 2); beta-glucosidase/ hydrolase, hydrolyzing O-glycosyl compounds | 1542 | 3e-171 |
| AT5G24550.1 BGLU32 (BETA GLUCOSIDASE 32); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | 202 | 6e-016 |
| AT5G24540.1 BGLU31 (BETA GLUCOSIDASE 31); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | 201 | 8e-016 |
| AT1G75940.1 ATA27; catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds | 197 | 2e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
