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Information for unigene UN06115
| FASTA Sequence |
| Unigene ID: UN06115 | Length: 1540 |
SSR | | GGGACCCTATGGAGAGTGGCCTCTCTCTCTCTATCTCTCGCCTCTCTACCCTAAGACACACTCACCCACTTCCTCCTCCTCCTCTT
CCATAAACCTCTCTCTTCTCTCTCTCTCTCTCCTGCCATGAAAATCGCAGACACAAACTCCTCCCATCTTGATGACTTCTGTGTCT
TCCTGAGTTTTGTCCGAACGCTCTGAAAACTTTACTTGCGAGACCCCAAAAAATAAACGGATAAATTTATAGAAAACTCATAAACA
AAAAGATCAAACCCCATGGCTGAGAATAATCTCACTTGTGGAGAAACCAGCGATTCATGGATCACTGATGATGACGTCAGCTGTGG
CGGCGGCGGGGGATTCATGAACGATCAACTTTTTAGTAAAGACCATAACTTTAACGTCAACGGATCAAACCCTATGATGATGGGAG
AAGAGAGAATCAGAGAGATGCTGGAGCGAGAGGTTGAGTTCTTGCCAGGACCTGATTACCTCAAGAGGCTGCGTTCTGGGGACTGG
GAGCTGCGTGTTAGGAACCAAGCTCTGGATTGGATTCTAAAGGTATGTGCTCACTACAGTTTTGGAACACTCTGCATTTGTCTGTC
CATGAACTACTTGGATCGGTTCTTAACATCCTATGAACTGCCTAGAGACAAGACATGGGCTGTTCAGTTGCTAGCTGTCTCTTGCC
TATCATTAGCAGCTAAAATGGAAGAATCAGATGTGCCTCAAACTGTTGAGTTACAGGTGGGAGATCCCAAGTTTGTTTTTGAGGCC
AAAACGGTTAAAAGGATGGAACTTTTGGTACTCAACACTTTGAATTGGAGACTGCAAGCTCTAACTCCATTCTCCTTCATTGATCA
TTTCATTTACAAGACCAACGGCCACGTGTCAGAGGATTTGATATATAGGTCATCACAATTCATCTTGAACACCACTAAAGCAATTG
AATTCTTGGACTTCAGGCCTTCTGAGATAGCTGCAGCAGCGGCAGCGTCTGTTGCCATTTCAGGAGAAGTAAATTGCATTGATGAT
GAAAAGACAATGTCTAATGTCACATATGTTAAACAGGAGAGAGTGAAGGTATGTTTAAATCTGATGAGAGACCTCACAGGGGAGGA
TGTGACGGGTGCTACATTGTCGCTACAGCGGCCGAGATTAGTGGCAAGAGTGGTACCGGTGAGTCCAATTGGTGTGTTGGAAGCAA
CATGTTTGAGCTATAAGAGTGATGAGAGAACAGTTGAGTCATGTACAAGTTCCTCACAGAGTAGTCCAGATACCAACAATAGCAAC
AAGAGGAGGAGAAAACAATGAGAGAGAAATAAAGAGTCATAACATTGCTTTTTTCCATCACCAATCCATAAGGGTCATGACATTTG
CGGTTCTTTATATTTTTGGTTTATTCCTCTTTTTTTGAACTTAGATTTCTTTACTTTTCTTTGGTTTCTCATCTTCAACCTGAGTT
TTGTGTGAGAGAAAAAATAAAAATAAAAATAAAAAATAAACAGGGATCTTATGATGAGAGACATCCCTATTCATGATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880446 CYCD2_1 [Arabidopsis lyrata subsp. lyrata] | 1378 | 7e-150 |
| NP_001189576 cyclin-D2-1 [Arabidopsis thaliana] | 1297 | 2e-140 |
| S51651 cyclin delta-2 - Arabidopsis thaliana | 1245 | 2e-134 |
| NP_179835 cyclin-D2-1 [Arabidopsis thaliana] | 1239 | 1e-133 |
| BAF00198 putative cyclin D [Arabidopsis thaliana] | 1233 | 5e-133 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SXI2 Cyclin d, putative | 815 | 1e-084 |
| Q9ZRX9 Cyclin D2.1 protein | 784 | 4e-081 |
| B9RJU5 Cyclin d, putative | 735 | 2e-075 |
| Q8L6U0 Cyclin D2 | 724 | 3e-074 |
| C6THY5 Putative uncharacterized protein | 663 | 4e-067 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G22490.1 CYCD2;1 (Cyclin D2;1); cyclin-dependent protein kinase regulator/ protein binding | 1310 | 2e-144 |
| AT5G10440.1 CYCD4;2 (cyclin d4;2); cyclin-dependent protein kinase | 598 | 8e-062 |
| AT5G65420.1 CYCD4;1 (CYCLIN D4;1); cyclin-dependent protein kinase regulator | 592 | 4e-061 |
| AT1G70210.1 CYCD1;1 (CYCLIN D1;1); cyclin-dependent protein kinase regulator | 466 | 2e-046 |
| AT3G50070.1 CYCD3;3 (CYCLIN D3;3); cyclin-dependent protein kinase | 439 | 2e-043 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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