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Information for unigene UN06173

FASTA Sequence
Unigene ID: UN06173Length: 1453 SSR 
GATCATAATGCTCAAAATTATCTCTTAAGTTGGAGATACGAGGAGAAAACAACGACAAGAAGCATAAAAACAAAATCCATTGTCTG
GTTTATTAGTAGCAAATAACAGAAAAAAAACAAAAAAAAAAAAGAGATGAGATATTGCAAGTAATATACTTTTCAAGGCAAAGAGA
CTCAAAGAGACCAGTTGTTATGGTGTGAAGAAGAGTCATAATCCCTTGTGTTCTCATCTTCCATGTACTGCCTCCTGTTCTGATGA
TGATGATGATGATGATGATGGTCAGATAACTCAAACTCACCCATCGTCGTTCCACCGCTTGTATGGTAATTATCTGACTCGGTGAA
CCGTCCCAAATTCAAAACAGGAGACATATCATTCGGACAGTTATTATCATCGTCCTTGAAAACCCAAGGCGGGTTCAGATACTGAT
GCTGGCTAGGTGCAGGTGGTGGCTGAGCCATTGTAACCGTCATCGGGCCAAAACCCGAAGAAGTTCTCCATGCGTCGTTGTTGTTG
TTGTTGATGTTGTTGTCTTGTGGCTGATGTGGATTTGACAGAAGAGAGAGAGCACAGTTTGAGTCGCTGCCAATTCCCTTGTAGCT
CTCTGGTTTAGTGTCCATAATATCTGGTGATGAGAAGCTTATCCCTCCTCCACTTACTGATCCTTGACTAAACACATTCATTGGAT
TGATCTGCCATGATGGTGCTGCCACTGGCTGTCTCATCGCTCTTGTATCTAACGTTCTTGAACTTGTCCACCCCATATCTTGTGAA
CCAAGAAAGCTCCCATTCATTGTAGTTTCAGCAGTTCCGTAAAGAGAAGGTACAATCCTCCCGAAACGGGAAGACAACACAGAGAG
AGACGCAGGCTGCGGCTTCCTCCGTCGTTCATTATGACCAGCGAGTCTCCTACGGCAACTCCTTTTCTCTAGGTCAAATTCTTGGA
GCTGATGAAACCTGCTGCACTGTTGACAAAACCTCTGTTCGATACCAGCGACAGTGGCTTTAGGTGTTTTAGAGTGCATTCCACAA
ACTCTGTGTCTCGAGTAATAACCTTTTGCATTGGTTAGATCCATTCCACAACCTTCTACTTGGCACCTTGGTATCGGACTTGATTG
ACCCGACCCGCCTCCACGTACCCTTCTATTTGACCCGCCGGAGGAAGAAGACCCGCCTCCACCGTCCTCGAAGTAGATCTTCTGCC
CAAACATGAGGCCTCCACTGAAAGAGGAGGACTCATTCGATGAACCACCGGACTCTGCCTGACCAGGACCACGACCCTGACCCGAG
TTTGAACCCATATTCATATTTGTTTCCTTTTATTCAGACAGAAAGAGAGTACTTGCTTATCATTCCCTCTCTCTCTCTCAAACCTA
TAACTGTCTTGGTTTAAAGAAAGGACGAAAGGAGAAACAAAGCAAAGAAAAGTGAGAGAGAGAGACAACAGAAGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34624 unnamed protein product [Thellungiella halophila]16969e-187
CAG25585 putative squamosa-promoter binding protein [Arabidopsis thaliana]16564e-182
NP_181749 squamosa promoter-binding-like protein 9 [Arabidopsis thaliana]16422e-180
AAK76681 putative squamosa-promoter binding protein [Arabidopsis thaliana]16287e-179
CAB56591 squamosa promoter binding protein-like 9 [Arabidopsis thaliana]15768e-173

Swiss-Prot top hits (Blast detail)Scoree value
Q700W2 Squamosa promoter-binding-like protein 916427e-182
Q9M2Q6 Squamosa promoter-binding-like protein 157376e-077
A3C057 Squamosa promoter-binding-like protein 174591e-044
Q7EXZ2 Squamosa promoter-binding-like protein 143792e-035
A2X0Q6 Squamosa promoter-binding-like protein 33433e-031

TrEMBL top hits (Blast detail)Scoree value
D6QZ29 Promoter-binding protein SPL95774e-057
Q9SNV4 Squamosa promoter binding protein-homologue 4 (Fragment)5112e-049
A2Q4T4 SBP4994e-048
B4FXD9 Putative uncharacterized protein4403e-041
B6U6Y0 Squamosa promoter-binding-like protein 94394e-041

Arabidopsis top hits (Blast detail)Scoree value
AT2G42200.1 SPL9 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 9); transcription factor16426e-183
AT3G57920.1 SPL15 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 15); DNA binding / transcription factor7431e-078
AT1G27360.1 squamosa promoter-binding protein-like 11 (SPL11)3352e-031
AT1G27360.2 squamosa promoter-binding protein-like 11 (SPL11)3352e-031
AT1G27360.3 squamosa promoter-binding protein-like 11 (SPL11)3352e-031

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information