RadishBase

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Information for unigene UN06178

FASTA Sequence

Unigene ID: UN06178	Length: 1235	SSR
GCTCTGAAGTGGAATCTTTAACTGTGCCTTTTGTCTAACTTTATCAGTCACCAAGATCGATTTCTCTGTTTTTATAAATTTCTACT AATAAACATAAAACAGTAAAAACATACATCAGGAAAGCTTTCCAAGTAAAAATCTTGCAAGACTAAGGATGCTTCAGTGGTCATCA ATAGTCGCTTACTACGAGATTATGCTTTGTTTCAGCATCAACGTTGGAGAACGCTGTCTCTTGAAGTAAACTTGTCTCCATGTAAT GTGATTTTCCAGCAGTCGAGTTGGATGATGAAGACAGAAGGCTTCTTCGGTACAACTCGAAGTTTATCTTCTCTTGTGATTATTCC AAATGTTTGGGATGTCTCGCGGATCATTATGCCTTGTACACCAGTGAATGATGCAATCTTGCATTCAGCAACAAACATGAAAGCAC CGTGAAGATCTGCTGATAGAAGAGTTGAGGTTAGCTGAGCCTTCCCGGTCACCTTGATGAGTTTCATCATGTAACTTTCCCACATA CCATGCATCGGCTTATACAAATCAAACTTTTGGAGATCCTGTGGCAAATTCAAAGCACCAGATTTCTTGAGCCGCCTCATAGACAT GCGGGTTTTAGAACGTTTAGAGTTCATCAGCGATGCTTTGGTAGAACCGGAGGAACGTGACTGTACAAAATTGTCAAGAAGGATGT AGTTGTTCTCCTCCACCTTCTTCTCATTTTTACCTTGCAAGTACTTTTGAGCAGAGTCACCGCTTCGGAGGAGAGTATGCGAAACC TTGTCAGCTATATTTTTCTTTCCACTAGACAACTTAACATTGGTTGCCAACAACTTGTCGTCAACGGGATAAGACAACTTTATATA CGCAGCAAAACCATCATCCTGGGGATCTTTTGTAATTGGTTTCTTTGGAAGAGGAGTAGGAGGCAGTGAGTGAGCTTTAAGTGGTT GTTTAGAAGAAGAGACATTGGCATCATCAGAAGCTCCCTTCTTGTCTTTATCATTCTTTTGTTGTTGTTGTTGTTGTTGACGAAGC TGATCTTTTTGAAGTCTTTGTTGGATAGCATCCATTGAACGTTTTCTCGGATCATGAACAACCGTCTCTGTAGCCATTTGCAAGCC CAGATGAAAACACCAAACCTTATTAATCGTCGATGCACGGCGAGCTACTGACCTGAGTTTCTATCGGCCGGAAGAGAGAGTAAACG GAAGGAAAAGTTTATTTTTTTATGAAGTCCC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_850389 ribonuclease P-like protein [Arabidopsis thaliana]	1022	1e-108
NP_565993 ribonuclease P-like protein [Arabidopsis thaliana]	1016	5e-108
XP_002880029 ribonuclease P family protein [Arabidopsis lyrata subsp. lyrata]	978	1e-103
XP_002297721 predicted protein [Populus trichocarpa]	711	1e-072
XP_002275005 PREDICTED: similar to ribonuclease P family protein [Vitis vinifera]	694	1e-070

Swiss-Prot top hits (Blast detail)	Score	e value
Q2KIB9 Ribonuclease P protein subunit p29	227	7e-018
Q5R7B0 Ribonuclease P protein subunit p29	227	7e-018
O95707 Ribonuclease P protein subunit p29	224	2e-017
Q9CR08 Ribonuclease P protein subunit p29	223	2e-017
Q5M882 Ribonuclease P protein subunit p29	223	2e-017

TrEMBL top hits (Blast detail)	Score	e value
Q3E7S5 Putative uncharacterized protein At2g43190.2	1022	7e-109
Q9ZW76 Expressed protein	1016	4e-108
B9GLV5 Predicted protein	711	8e-073
B9SBB5 Expressed protein, putative	527	2e-051
B8AZ39 Putative uncharacterized protein	481	4e-046

Arabidopsis top hits (Blast detail)	Score	e value
AT2G43190.3 ribonuclease P family protein	1038	6e-113
AT2G43190.2 ribonuclease P family protein	1038	6e-113
AT2G43190.1 ribonuclease P family protein	1027	1e-111

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


12	2			100%

Unigene Members	Member information