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Information for unigene UN06186

FASTA Sequence
Unigene ID: UN06186Length: 1202 SSR 
GGGAAATTAAAAAAGCAGAGCGAAAGCATCGTGATGAGTTCCGTGGGCTGATAGATGAACATATTGCAACAGGAGATCTTACTGCC
AAAACTAGTTGGCGTGATTATTTAATGAAGGTCAAAGATTTACCTGTATATTTAGCAATCGCATCGAACTCCACTGGAGCTACTCC
AAAAGACTTATTTGAAGATGCTGTTGAGGATTTGAAAAGAAAGTACCATGAGCTCAAATCTCAGATAAAGGACGTATTTAAGGTGA
GAAAGGTAACGTTATCCGCTGGATCGACGTTTGGTGAGTTCAAAGTCTCAGTTTCTGAGGGTATCGGTTTCCCATCTATTCCTGAC
GTCAAACTAAAGTTAGTTTTTGATGATTTGCTGGAAAGGGCAAAGGAGAAGGAAGAGAAGGAAGCTAGAAAACAGACTCGGAATAC
TGAGAAATTGGTGGATATGCTTCGCTCCTTCAAGTATATAACTGCCTCTTCATCCTGGGAGGATTCTAAGCATCTTGTTGAAGGTA
GTGAAAAATTCCGTTCTATAGGAGACGAGAGCTTTCGGAAGAAGACATTCGAGGATTACCTTTCGCACCTCAAAGAGCAAGCAAAA
AGGATCAAACAGAACAAGAAGGAACATGTTAGAGAGGAACATTACAAGGGGAATGATAAGTACGGAAGAGAGAAGGACAGAGTGCG
AGAAAGAGACAGTAGAGATCATCGTAAGCAAGGTTCAGCTGATAATCACAACCATAATGTGGACGAACTCCGTGGAAAAGAAGGTA
GAAGATCAGGAAGAGATAGCCACAGTAGACATGGAGAAAGACATACTAGCGTGAAGGAAATTGAGACGGACCATTACAAAGAATCT
CATAAAGCTGGTGGTGGCCATAAGAAATCAAGACAAGAGCGAGGTTTTGTGCTAGAAGCAGAGGATGAAGGCAGGGAAAAGAGGCG
TAGAAAAGAGGGAGAGAGCGAGCAACATACAAAGGGTGCGGAAAAGAAGAGGAGCTTGAGATGGAGAATGTGGTAGTATAAATATA
TATATATATCTACTCCCATCATTGGGAGAGATGTAGCTTCTATTTGCTTGGGTTGATTTTTGAGCATTAAACTATTTTGTCACAAA
CAATTGTCAAGCGAGCTGCAGCTTTTAACGTAATCAGAGATGGATGAGTAGGAGTTTTTCCTTGTTTCATCACCGTTTTTGTCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885323 FF domain-containing protein [Arabidopsis lyrata subsp. lyrata]13642e-148
NP_188601 pre-mRNA-processing protein 40B [Arabidopsis thaliana]13401e-145
BAB02553 formin binding protein-like [Arabidopsis thaliana]7881e-081
XP_002283496 PREDICTED: hypothetical protein [Vitis vinifera]7532e-077
CBI19367 unnamed protein product [Vitis vinifera]7532e-077

Swiss-Prot top hits (Blast detail)Scoree value
O75400 Pre-mRNA-processing factor 40 homolog A3021e-026
Q9R1C7 Pre-mRNA-processing factor 40 homolog A2984e-026
P34600 WW domain-containing protein ZK1098.12375e-019
Q568R1 Coiled-coil domain-containing protein 551344e-007
Q6P7Y3 Pre-mRNA-splicing factor 38B1292e-006

TrEMBL top hits (Blast detail)Scoree value
Q9LJM8 Formin binding protein-like7889e-082
B9GIM8 Predicted protein7289e-075
B9S7Z7 Protein binding protein, putative7242e-074
B9HN22 Predicted protein7207e-074
B9IBN8 Predicted protein6875e-070

Arabidopsis top hits (Blast detail)Scoree value
AT3G19670.1 protein binding13405e-148
AT1G44910.1 protein binding6335e-066
AT1G44910.2 protein binding6202e-064

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  50%
 
92  50%

Unigene MembersMember information