Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN06199

FASTA Sequence
Unigene ID: UN06199Length: 1015 SSR 
GAGTGAAGATATATATATATATGCACGAACTGGAGAATTGTTGCCGTTCGCACAAATTCATAATATAAAGCGTGAATGTAAACAAT
GATATAAGGTTTTCTCCTTATTTTAGAATGGAAAACCTTCTGAATCTTTCTATATCCCAAACCGGTAAAGAATTGAACCGGTGTTG
TCTCGGATTAGTTTTTATCCTCTCAGGCTTTCTTCTGTTTCTTCTTCTGGGGTTTAGGTGGCGGGAAGATAGTACGGAAGACCAGT
GCAGCAGATAAAGCACCAACAAAAGAACTGATCCAGTACACGTAGAAATGGTCCCAAGTGTTGTGAGAGCTGTACATGTATGCCCA
CCCAAACGCAATGGCGGGATTCATGGCTGGTCCTGTGTATTTAGAGCCAGCGACAACGAAGCAAATGGTTGCAAGAGCGAGCAAGA
AGGTCTTGGCGAGTAATCTTCGTGGACCCCTGATGATAATAAGCAAAGCCGCAAAGGTGATACCGAAACTTAAGATGGTTTCAGCA
ATAGCTCCAGTGTGCACATCAACCTGAAGGGAAGGTCCAGAAATCATGTGCTTGTACTTCTCTGGTATGAACTCCATGATGGCCAA
TGCACCTCCTGCCGCACCAGCTGCCTGAGCAGGTAACCTGATGGCCAAGGTGAAAAGGGTATCTCCGGGGATACCGGCGGCATAGA
AGGCGGCGTTTCCGGTGGGATTAAAGCTAGCGCTACCGAATACAATGGTGAAGATGGAGACGTAGACGAAAATAAGAAACGTGGTG
ATGGCCAGCGGAGCCCAAGCGATCCCCTGAAACCCAGCGGCGGAGATGATCTCCGTCGTCTGTAAACCGAACGTCGCGGAGAGGAC
AACCCACGAGAAGGTCATCAGCATATCCCCAATCGCTGACTTCACAACACCCATTTCTTTCTTCTTCAGTTTCAGTTCTTCTTGCT
CCTCTTTGCGCGTGAGTGTTGAGAAGTCTTGTGTGTTTCGGGATCTGGGGTAGTTGTTGACCTGTATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884428 SIP1_1 [Arabidopsis lyrata subsp. lyrata]11222e-120
NP_187059 aquaporin SIP1-1 [Arabidopsis thaliana]11105e-119
XP_002325395 aquaporin, MIP family, SIP subfamily [Populus trichocarpa]7825e-081
DAA33876.1 TPA_inf: aquaporin SIP1;2 [Gossypium hirsutum]7621e-078
XP_002525471 aquaporin sip2.1, putative [Ricinus communis]7503e-077

Swiss-Prot top hits (Blast detail)Scoree value
Q9M8W5 Aquaporin SIP1-111102e-120
Q9FK43 Probable aquaporin SIP1-28602e-091
Q9ATM2 Aquaporin SIP1-26721e-069
Q5VR89 Aquaporin SIP1-16424e-066
Q9ATM3 Aquaporin SIP1-16121e-062

TrEMBL top hits (Blast detail)Scoree value
B9IPL3 Aquaporin, MIP family, SIP subfamily7824e-081
B9SHK2 Aquaporin sip2.1, putative7502e-077
C7E663 Simple intrinsic protein SIP1.2 (Fragment)7431e-076
B9I5U1 Aquaporin, MIP family, SIP subfamily7279e-075
Q107W9 Putative uncharacterized protein7181e-073

Arabidopsis top hits (Blast detail)Scoree value
AT3G04090.1 SIP1A (SMALL AND BASIC INTRINSIC PROTEIN 1A); water channel11111e-121
AT5G18290.1 SIP1;2; water channel8611e-092
AT3G56950.1 SIP2;1; transporter2437e-021
AT2G16850.1 PIP2;8 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;8); water channel1219e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  50%
 
122  50%

Unigene MembersMember information