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Information for unigene UN06199
| FASTA Sequence |
| Unigene ID: UN06199 | Length: 1015 |
SSR | | GAGTGAAGATATATATATATATGCACGAACTGGAGAATTGTTGCCGTTCGCACAAATTCATAATATAAAGCGTGAATGTAAACAAT
GATATAAGGTTTTCTCCTTATTTTAGAATGGAAAACCTTCTGAATCTTTCTATATCCCAAACCGGTAAAGAATTGAACCGGTGTTG
TCTCGGATTAGTTTTTATCCTCTCAGGCTTTCTTCTGTTTCTTCTTCTGGGGTTTAGGTGGCGGGAAGATAGTACGGAAGACCAGT
GCAGCAGATAAAGCACCAACAAAAGAACTGATCCAGTACACGTAGAAATGGTCCCAAGTGTTGTGAGAGCTGTACATGTATGCCCA
CCCAAACGCAATGGCGGGATTCATGGCTGGTCCTGTGTATTTAGAGCCAGCGACAACGAAGCAAATGGTTGCAAGAGCGAGCAAGA
AGGTCTTGGCGAGTAATCTTCGTGGACCCCTGATGATAATAAGCAAAGCCGCAAAGGTGATACCGAAACTTAAGATGGTTTCAGCA
ATAGCTCCAGTGTGCACATCAACCTGAAGGGAAGGTCCAGAAATCATGTGCTTGTACTTCTCTGGTATGAACTCCATGATGGCCAA
TGCACCTCCTGCCGCACCAGCTGCCTGAGCAGGTAACCTGATGGCCAAGGTGAAAAGGGTATCTCCGGGGATACCGGCGGCATAGA
AGGCGGCGTTTCCGGTGGGATTAAAGCTAGCGCTACCGAATACAATGGTGAAGATGGAGACGTAGACGAAAATAAGAAACGTGGTG
ATGGCCAGCGGAGCCCAAGCGATCCCCTGAAACCCAGCGGCGGAGATGATCTCCGTCGTCTGTAAACCGAACGTCGCGGAGAGGAC
AACCCACGAGAAGGTCATCAGCATATCCCCAATCGCTGACTTCACAACACCCATTTCTTTCTTCTTCAGTTTCAGTTCTTCTTGCT
CCTCTTTGCGCGTGAGTGTTGAGAAGTCTTGTGTGTTTCGGGATCTGGGGTAGTTGTTGACCTGTATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884428 SIP1_1 [Arabidopsis lyrata subsp. lyrata] | 1122 | 2e-120 |
| NP_187059 aquaporin SIP1-1 [Arabidopsis thaliana] | 1110 | 5e-119 |
| XP_002325395 aquaporin, MIP family, SIP subfamily [Populus trichocarpa] | 782 | 5e-081 |
| DAA33876.1 TPA_inf: aquaporin SIP1;2 [Gossypium hirsutum] | 762 | 1e-078 |
| XP_002525471 aquaporin sip2.1, putative [Ricinus communis] | 750 | 3e-077 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M8W5 Aquaporin SIP1-1 | 1110 | 2e-120 |
| Q9FK43 Probable aquaporin SIP1-2 | 860 | 2e-091 |
| Q9ATM2 Aquaporin SIP1-2 | 672 | 1e-069 |
| Q5VR89 Aquaporin SIP1-1 | 642 | 4e-066 |
| Q9ATM3 Aquaporin SIP1-1 | 612 | 1e-062 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9IPL3 Aquaporin, MIP family, SIP subfamily | 782 | 4e-081 |
| B9SHK2 Aquaporin sip2.1, putative | 750 | 2e-077 |
| C7E663 Simple intrinsic protein SIP1.2 (Fragment) | 743 | 1e-076 |
| B9I5U1 Aquaporin, MIP family, SIP subfamily | 727 | 9e-075 |
| Q107W9 Putative uncharacterized protein | 718 | 1e-073 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G04090.1 SIP1A (SMALL AND BASIC INTRINSIC PROTEIN 1A); water channel | 1111 | 1e-121 |
| AT5G18290.1 SIP1;2; water channel | 861 | 1e-092 |
| AT3G56950.1 SIP2;1; transporter | 243 | 7e-021 |
| AT2G16850.1 PIP2;8 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;8); water channel | 121 | 9e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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