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Information for unigene UN06201

FASTA Sequence
Unigene ID: UN06201Length: 1297 SSR 
CGGAAACAAAGCACAAATGTCTATGAAGTTTTATTTTTGAAGTTGGGACTACTTCGAGGTTTGTATTCTACGATGGCTACAAAGCG
AAGGTAAACAAGTTTTTCAAAAAGCTAAAGAGAGGGATTTAGCAAAAACAATTGAAAAAAACACTACATTACAGAGAAACAATCTA
TTATCAACAGAGATTTCAAAATCCTCTGTTTCTTGACCTGTTCTGATCATAGTGTTGCCCTGAGCCACCATTTTGATTATCCCACC
AACCATCTTGAGGCGGTCTAACCATCGTCCTGCTTTGATCCTGAATACCCATCTCAGGTCTGAACCCAGGAGGTGGAGGCGGGGGT
GGTGGAAGCTGGTGGCTAGGGACATTTGGCCGCCATTCTGGTATGTCGTCATCATCATTGTCATTATTATAGCTCCTTGCAGAGTT
TCCATACATGTGGATGAGCTGTCTTACTTGATCCAAAGACTTGGGTTGAGACGGTAATGGCTGGTGAGAAGAAACTGGCACGACCG
ATGATGAACTGAAGTTAAATTCCGGTAAATCATCATCATCTCTCGAAGCTACAGGACCAAACCCAGGTGGCGCATCATCATCATCA
TCTTCTTCCACAGCTTTGCCTCCATAACCATGATGATTGTTCCCCACTGATGCAGCAACAGGAGGTTTCTCTGTGAGATTCCCTCT
CTGCTTCTTGTTTTCAGGCACAACAGATGCTCTAGAGCCAGAAGAAGCGTGAGAATGCTGACGTTTCAAACTGGGCTTGTTGACGG
GTCGTCTCCACACAACAACAAGCAGCCCACTATCCAAAGACTTGATTTCATCGAGCTGGTCTTTAGAGATGACTTTAGTCAGCAAA
TCTAGAGTCTCGCCACGTGTTGGGCAAAGGTAAAGCTCCACACCTGAGGCTGGCTCTGCGTAGCCAACTCTTTTATCAGCAACGTA
GGAATCAACAACCTCAAAAAGGCTGCCACGCTGGCTCTTCGAAATGCCGTCTTTACAAGCCAAGTACATTACCATTAGGGTACGGG
ATCGAGACTTGGGAAGCTCTTGAATAAACTTCCTCAAACCCACTCAGCCTAACTCTACCCTTCACTTCCAACATTGCGGGCCACTC
GCTCGTGTCTGCTTTCTCACCACTTCTGAAAATTCCAGTGACAGGGACTACGGAAGACATACTCAGTTGCAGTAATCCATGCCATA
TTTTTTCTCCCTTAATATCAGCAATGGAAGGCGTTTTCTCAAGTCCAGAGACATCATCATCAACTTTGACACTGACGTCAGATTTT
GGAGAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871474 hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp. lyrata]10982e-117
CAB87703 putative protein [Arabidopsis thaliana]10561e-112
NP_196704 SPOC domain / Transcription elongation factor S-II protein [Arabidopsis thaliana]10561e-112
XP_002872169 hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp. lyrata]7479e-077
NP_974833 SPOC dand transcription elongation factor S-II domain protein [Arabidopsis thaliana]7334e-075

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LYE6 Putative uncharacterized protein F15N18_2010891e-116
Q3E7G3 Putative uncharacterized protein At5g25520.27332e-075
B8B4E3 Putative uncharacterized protein4367e-041
A3BD94 Putative uncharacterized protein4332e-040
A5AN42 Putative uncharacterized protein3892e-035

Arabidopsis top hits (Blast detail)Scoree value
AT5G11430.1 zinc ion binding10905e-119
AT5G25520.2 transcription elongation factor-related7341e-077
AT2G25640.1 zinc ion binding3073e-028
AT5G25520.1 transcription elongation factor-related2393e-020
AT3G29639.1 CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue C-terminal (InterPro:IPR012921); BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT5G11430.1); Has 23 Blast hits to 23 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1855e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  20%
 
64  80%

Unigene MembersMember information