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Information for unigene UN06245

FASTA Sequence
Unigene ID: UN06245Length: 956 SSR 
GTGTTTTGGCTAGAATGGTCATGGAGAAGTGTGTTGGTAGATTCGATGTAGCCATGTTCAATGCTATTCTTCGAGAGTCAGAGCAT
CAGATCCCAACCGATCCCGTCTCTGATCCTATTCTTGATTCCAAAGTTCTGCCTATTCCTGCTGGAGACTTGAGCTTTGGTTCAGG
AGCACAGCTCAAAACGCGATTGGTAACTGGTCTAGATGCCTCACTGAAATGTTCGGTATGAACTCAGATGATGATCATGTTGTAGA
GAGTGAAGGCAGTGATAGTGGTAGTAAAGCCTTTGTGTTGTTAAATGAACTTAGTGATCTTCTTATGCTCCCTAAAGACATGCTTA
TGGAAAGTTCCATTAGAGAAGAGATATGTCCATCAATCACTCTCTCACTAATCAAGAGAATACTATGCAACTTCACTCCCGATGAG
TTCTGTCCAGATCATGTACCTGGAGCTGTCTTAGAAGAACTCAATGCTGTTGAGAGCAATGGATCAGAAGAAGAAGAAGAAGCAAG
CTTCTTCCCTTATGCAGCTTCTTCTGTTACTTACAAGCCTCCATCGACCATGGATGTAGCAGAGAAAGTTGCAGAGGCTGCGGGAA
AGTTGTCGAGGAATGTGTCTATGATACAGAGGAAAGGGTACACGAGCGACGAGGAGCTTGAGGAGCTGGACTCTCCTCTTACATCT
ATTGTTGATAAAACGAGTGAGTTTAATGATTCTTCGACCTCAAATGCAAGATACAAGCTTCTTCGTCAAGTGTGGGCTTAGTTGAG
TGAGAGTCATTTTGGAAACAAAGTAAAAAACTGTGAGCAATGTGTTAGTTACTGTGAGTTGTCTCTATGGCTATTTTAAAAAGAGT
ATGTTCCAGTGAGATAATGTGGAGAGCTTCTGTTACATATAATTTTATATATGTAAAATCAGAGAACAAGTCAAACAGGAGATTGA
GATTCTGAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879979 hypothetical protein ARALYDRAFT_483324 [Arabidopsis lyrata subsp. lyrata]8103e-084
NP_181761 nucleolar protein gar2-like protein [Arabidopsis thaliana]7987e-083
BAD93748 hypothetical protein [Arabidopsis thaliana]7987e-083
AAM61597 unknown [Arabidopsis thaliana]7243e-074
XP_002878171 hypothetical protein ARALYDRAFT_486231 [Arabidopsis lyrata subsp. lyrata]5925e-059

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q570M4 Putative uncharacterized protein At2g423207985e-083
Q9SLC7 Putative uncharacterized protein At2g423207985e-083
Q8LF58 Putative uncharacterized protein7242e-074
Q9SVZ2 Putative uncharacterized protein F15B8.305638e-056
B9II42 Predicted protein (Fragment)5503e-054

Arabidopsis top hits (Blast detail)Scoree value
AT2G42320.1 nucleolar protein gar2-related7992e-085
AT2G42320.2 nucleolar protein gar2-related7992e-085
AT3G57780.1 EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3024 Blast hits to 2177 proteins in 255 species: Archae - 2; Bacteria - 181; Metazoa - 988; Fungi - 289; Plants - 172; Viruses - 72; Other Eukaryotes - 1320 (source: NCBI BLink).5635e-058
AT3G01810.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 1293 Blast hits to 384 proteins in 97 species: Archae - 2; Bacteria - 96; Metazoa - 212; Fungi - 99; Plants - 59; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink).4103e-040
AT5G06930.1 LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3144 Blast hits to 1363 proteins in 247 species: Archae - 2; Bacteria - 721; Metazoa - 835; Fungi - 297; Plants - 80; Viruses - 10; Other Eukaryotes - 1199 (source: NCBI BLink).4013e-039

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  100%

Unigene MembersMember information