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Information for unigene UN06252

FASTA Sequence
Unigene ID: UN06252Length: 631 SSR 
GGATACTTCATCATCCTCATTTCGTCGTCTCTGCAGATACTCGCTCTCGTCGGAGTTTTTCATTTTCACCCTGCAGAGCTCGCGAT
CTTATTTTAACTCCTCGGATCTTAAGAGAGAGAGAGATGGCGTCGAGAAACTCCGTAGCCGGATTCGCGTTATTCACATTTGTATT
CGCCGTCATCTCGTCTCTCGCCGGCGCTCAAACCCTAGCTCCCGCTCCAGCTCCCACCAGTGACGGGACATCGATAGATCAAGGGA
TTGCGTATTTGCTAATGGTGGTGGCGCTTGTCCTCACTTACCTTATCCATCCTCTCGATGCTTCTTCTTCCCTCTCCTTCTTCTGA
TTTTTCTTTTTTTTTATCCTTCTAGTAGTTTGTGGATAACATTCTCTTTAAAGAGTGAGTCTCTCAAGGCTATTTAATTTGCTCAT
GATTTGTGCTTCTGTCATGATTCCTGGAGATTGAATCTTTCTCTATTGTTTTCCATCAATCATATTGTTTGTTTGTTCATCCTCTT
TTATTATTTAATTTATTCTTAGTTCATATATACATGTGTTGTTTATAGAAGAAGAAGCCTCAAAATGACAAGAGGTGGTTATGTCA
ATTTAATAAAACTCTGACCATTGTGTTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566070 arabinogalactan protein 16 [Arabidopsis thaliana]3297e-029
NP_191723 arabinogalactan protein 20 [Arabidopsis thaliana]2965e-025
XP_002878394 hypothetical protein ARALYDRAFT_907707 [Arabidopsis lyrata subsp. lyrata]2501e-019
XP_002532657 conserved hypothetical protein [Ricinus communis]2331e-017
XP_002280494 PREDICTED: hypothetical protein [Vitis vinifera]2241e-016

Swiss-Prot top hits (Blast detail)Scoree value
O82337 Arabinogalactan peptide 163294e-030
Q9M373 Arabinogalactan peptide 202962e-026
Q9FK16 Arabinogalactan peptide 221654e-011

TrEMBL top hits (Blast detail)Scoree value
B9T338 Putative uncharacterized protein2337e-018
A5BTA7 Putative uncharacterized protein2247e-017
A9PBL3 Putative uncharacterized protein2202e-016
B4FIH4 Putative uncharacterized protein2166e-016
C5YUS6 Putative uncharacterized protein Sb09g0071502141e-015

Arabidopsis top hits (Blast detail)Scoree value
AT2G46330.1 AGP16 (ARABINOGALACTAN PROTEIN 16)3303e-031
AT3G61640.1 AGP202972e-027
AT5G24105.1 AGP41 (ARABINOGALACTAN-PROTEIN 41)1852e-014
AT2G46330.2 AGP16 (ARABINOGALACTAN PROTEIN 16)1717e-013
AT5G53250.1 AGP22 (ARABINOGALACTAN PROTEIN 22)1654e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  50%
 
121  50%

Unigene MembersMember information