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Information for unigene UN06269

FASTA Sequence
Unigene ID: UN06269Length: 1096 SSR 
GGCCCATGAACGGGTCAAGCAAGATAAACATCTTTTTTGCAACTACCAACGAGTTGTTTCCGAACATAACTCACTTACGTATCCAC
TCCTCTCTCTCTCTCGTTCTTGCAAGATTGCTATGTTAGATCCTTCATCTAAAACCTACAGTCACCACTTGAGTTTCCCAACTGTT
CCCAATGATCACTCAGATTCCGGCGTCTGTTCTCCTACTCTGTGGAGCACAAGTCCACCGAGGAGTCCTCTTCACCGGCCGGAACA
CTACTCCAGCCTTTCTCCGGATTCGAAGGCTCAGGCTATCGCTCGTGGACAACGGGAGCTTATGGAGATGGTTAGTAAGATGCCAG
AGTCGTGTTACGAGCTTTCCTTGAAGGATCTTGTCGAAGCGAGGGGAAACGAAGAGAATAACGACAGGAAGATCTTCGATGAGTTG
ACTCAGAGAACAGGTAAGGTTGTGAGGAAGACGAAGAGTGGTAAACGGGTTGATCCGAGTGTAAACAACGGTGGGTTTCTTCTCAA
AATGATGTTTCCGTTTAGCTTCGGATCTAACAAAGATACGGCGAAAAAGAAGAAGAGAAAGGGGAAGGACTCTGTTAAAGATTCTC
AGGTTTCGCCGAGACCTTCGATCTCTGATGAGTCGGTGAAAACAGAGGATAGAGAGTGGTGGAATAGGTTGTCTGAGTCGAGGGGT
AGTGAGAGCACAAAGAGGAGCGGTAGTAGCAATAGCAACAGGAGCCTAAGCAGCATAAGGGATAAAAAGAGTAGCTGCTTGTTGTC
TTTCCTCTGGTTTGTACGTTCACGAGACTAAAAGCGAGTTCTAACTCAATGTATGGTGGTGACCGCTTCTTGGCTAAATAAAAACG
TTCCAAGAACAGAGGAGATGAGACAAGAGAGATTAAAACCTTTGAATGTGCGACGAAGATGACAAGATAATACTCCTACATTTTTT
GCTTTGTTTTTTTTGTAAGCCTGTGTATTGTTTTCGATAAGGTTTTATTTTGTGTAATTAGAGTCTAATGTGCACTGATTATCTCT
CAATTATGGAATTTTGAATCCTACTTCATGTACAGTAGTATGTGTAGCTTAACTTTTTCTCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893161 hypothetical protein ARALYDRAFT_472375 [Arabidopsis lyrata subsp. lyrata]7656e-079
NP_173561 embryo defective 2170 [Arabidopsis thaliana]7442e-076
XP_002862501 hypothetical protein ARALYDRAFT_497423 [Arabidopsis lyrata subsp. lyrata]5773e-057
NP_177824 uncharacterized protein [Arabidopsis thaliana]5765e-057
NP_001154473 uncharacterized protein [Arabidopsis thaliana]5765e-057

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q52K83 At1g213907441e-076
O49284 At1g769805763e-057
B9GTQ4 Predicted protein4511e-042
A5C140 Putative uncharacterized protein4043e-037
B9S2P7 Putative uncharacterized protein3821e-034

Arabidopsis top hits (Blast detail)Scoree value
AT1G21390.1 emb2170 (embryo defective 2170)7446e-079
AT1G76980.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: emb2170 (embryo defective 2170) (TAIR:AT1G21390.1); Has 33 Blast hits to 33 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 2; Fungi - 7; Plants - 14; Viruses - 2; Other Eukaryotes - 4 (source: NCBI BLink).5762e-059
AT1G76980.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: emb2170 (embryo defective 2170) (TAIR:AT1G21390.1).5762e-059

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
126  86%
 
181  14%

Unigene MembersMember information