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Information for unigene UN06288

FASTA Sequence
Unigene ID: UN06288Length: 1059 SSR 
GGATTATAAATTGCCCCCGAAACCTCTGCCTCTCTTCATCCTCTTTAGCTGCAACTTCTTTTATTCAAATCTTTCTTCTCAAAATC
ATCAAACAATGGAATTCTGGGGAGTTGAAGTTCTAGCAGGGAAGTCAGTTAAAGTGAAGCCTGATTTTGAAACACTCATCCATGTT
TCCCAGGCATCACTTGATAAAGGGAAGAAGGGAGAGACCGCTTTGTTGTATGTGACGGTTGATGGGAAGAAGCTTGTGATGGGAAC
ACTCTCTCAAGGCAACATTCCTCAGATTAGCTTTGATCTCGTCTTTGAGAAGGAGTTTGAGCTTTCCCACAGTTTGGAGAGCGGAA
GTGTCCACTTTGTCGGATACAAATCCCCCAACACGTCCGAAGAGGAGGACTTCTCTGATTCAGAAGAGGAGGAGGAAGCTGCAGCA
GTTCCTGCAGCTGTCACTGTCAAGGCTGACTCGAAACCAAAGGCCAAGCCTGTGGAGGAAGTGAAGCCTGAATCAGATGATGATGA
TGATGATGAGTCTGGCGAGGAGGATGATTCTGAAGAGGATGGGTCAGACTCTGAGAAAGGAATGGATGTTGACGAGGATGATTCAG
AGGATGAAGATGATTCTGAGGATGAAGATGATGAGACCCCTAAGAAGCCTGTGGTGTCCAACAAAAAGCGGCCTAATGAATCTGCT
GCTTCCAAAGCATCTCTTTCAGCAAAGAAGGCAAAACCAGCTACACCACACCCGGCTAAAAAGGGTGGGAAGAGTCCTGTGAATGC
TAACCAGAGCCCTAAATCTGGAGGTCAATCACCCTCCGGTGCTGGTTCTAACAAGAAGCAATTCAATTCTGGCAAGCAATTTGGTT
CTAACAACAAGGGCAAAGGAAAAGGAAAGGGCAGAGCCTAAGTTTTGAAGTTGGGAGTTCTGGATGAAAGAAACTGGTTTTTGTTT
TTATTTTTATTTTTTTGTTGTCTTAAGATTTTTTATCTAAATTGCAATTTTATAACTATTATGTAATTTCAGTATGAAAAGTGCTG
GATTGAGGAAGAATACTTTTTTGAATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197657 histone deacetylase HDT2 [Arabidopsis thaliana]6482e-065
XP_002313645 histone deacetylase [Populus trichocarpa]5139e-050
ABK92949 unknown [Populus trichocarpa]5111e-049
ACZ54947 type 2 histone deacetylase c [Nicotiana tabacum]4725e-045
XP_002875683 hypothetical protein ARALYDRAFT_484880 [Arabidopsis lyrata subsp. lyrata]4384e-041

Swiss-Prot top hits (Blast detail)Scoree value
Q9FVE6 Histone deacetylase HDT14292e-041
Q6V9I6 Histone deacetylase HDT14292e-041
Q56WH4 Histone deacetylase HDT24141e-039
Q9M4U4 Histone deacetylase HDT33933e-037
O24591 Histone deacetylase HDT13907e-037

TrEMBL top hits (Blast detail)Scoree value
Q3E700 Putative uncharacterized protein At5g22650.26481e-065
B9HQL3 Histone deacetylase5136e-050
A9P996 Putative uncharacterized protein5111e-049
A9P950 Putative uncharacterized protein4804e-046
A9P9Y3 Putative uncharacterized protein4804e-046

Arabidopsis top hits (Blast detail)Scoree value
AT5G22650.1 HD2B (HISTONE DEACETYLASE 2B); histone deacetylase8153e-087
AT5G22650.2 HD2B (HISTONE DEACETYLASE 2B); histone deacetylase6488e-068
AT3G44750.1 HDA3 (HISTONE DEACETYLASE 3); histone deacetylase/ nucleic acid binding / zinc ion binding4292e-042
AT5G03740.1 HD2C (HISTONE DEACETYLASE 2C); histone deacetylase/ nucleic acid binding / transcription repressor/ zinc ion binding4077e-040
AT5G63740.1 zinc finger protein-related1442e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  100%

Unigene MembersMember information