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Information for unigene UN06292

FASTA Sequence
Unigene ID: UN06292Length: 1257 SSR 
GGTGGCCAAGAACAGAACCTGTCACAGAGTATGAATGCTCCTACAAATACTGAAAGCAGCTCTGGGAGAGTCAATCATGGAAACAA
GGAGCAGTCAATAGAACAGGCTAGAGTGTGTAATGAGGAAAAGGTTAATGAGCTGATTCAAAAACCAAGTGGCTTGTCTCCTTTAC
AAGCTGCTGATCCATGTCCTGAACAGATATACCCAACACAACAGTCTGATCCAGTAAATGGATTCTCTTTCCTGGAAACCGAAGAG
CTGACATCACAAGTCTCTTCCTTCCAGTCTCTTGCCGGATCTTACAAGCAACCACTGATGCTATCCTCCAACGAGTCTTCACCCGT
TGTGCTACCTGATTCAACAAACTCACCGCTGTTTCAGGATGTGTGGGACAATCAGCTAAACGGTCTGAAGTTTGACCAGTTCAGTC
CCTGGATGCAGCAGGACCTTTATGGTGGTTGTCAGAACATGTGTATGAGCAATAGCACAAACAGCAACATTCTAGATACTCCTCCT
CCACTCTCGAACACAGTTCTTGATGACTTCTGTGCCATCAAAGAAACCGAGTTCAATTGTTTGGTCGGGAACAACAACAACAACAA
CAATAACAGTTTTGCTCAAGATGTGCAGTCGCAGATCACATCTGCTAGCTTTGCAGAATCACAGGCCTTGTCTCGCCAAGATAACT
CTGGAGGAACTGGTGGTACGTCTTCAAGCAATGTTGATTTTGATGATACTAGTCTGCTGCAGCAGAATAATAGTAAAGGCTCATGG
CAGAAACTTGCAACGCCCCGTGTCCGAACTTACACTAAGGTCCAAAAAACCGGGTCAGTTGGGAGGTCAATTGATGTAACAAGCTT
CAGGGACTATGAAGAGCTAAAGTCTGCAATTGAGTGCGTGTTTGGACTTGAAGGACTGCTCACTCGCCCGCAAAGCTCGGGATGGA
AGCTTGTATATGTTGATTATGAGAGTGATGTTCTTCTTGTAGGAGATGATCCATGGGAGGAGTTTGTGGGATGTGTAAGGTGCATA
AAGATACTTTCGCCAACGGAGGTTCAGCAGATGAGTGAAGAAGGAATGAAGCTTCTGAACAGCGCATGCATAAACGATCTCAAGAC
TTAATTTTAGCAAAATATGAACAATTATAGGGGAACCATCTTGTTGGGAAGCATTTGATGTGTTGCTCCGATTTGAAACCTGCATC
AATTTTAAGATTATGTAGTGAGTGATGAATGAATCAATAGTTCAAACTGTCTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34343 unnamed protein product [Thellungiella halophila]14332e-156
XP_002890356 hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp. lyrata]14063e-153
NP_173414 auxin response factor 5 [Arabidopsis thaliana]13831e-150
AAB92476 IAA24 [Arabidopsis thaliana]13831e-150
AAC60794 transcription factor [Arabidopsis thaliana]13777e-150

Swiss-Prot top hits (Blast detail)Scoree value
P93024 Auxin response factor 513836e-152
Q01K26 Auxin response factor 114411e-042
Q8S983 Auxin response factor 114411e-042
A2YAA5 Auxin response factor 163872e-036
A3B9A0 Auxin response factor 163872e-036

TrEMBL top hits (Blast detail)Scoree value
D3K043 Auxin response factor 5 (Fragment)7351e-075
D3K047 Auxin response factor 5 (Fragment)7351e-075
D3K044 Auxin response factor 5 (Fragment)7297e-075
Q8GT89 Hypothetical transcription factor6912e-070
D3K046 Auxin response factor 5 (Fragment)6786e-069

Arabidopsis top hits (Blast detail)Scoree value
AT1G19850.1 MP (MONOPTEROS); transcription factor13836e-153
AT1G19220.1 ARF19 (AUXIN RESPONSE FACTOR 19); DNA binding / transcription factor3602e-034
AT5G20730.1 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator3513e-033
AT5G20730.2 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator3513e-033
AT5G20730.3 NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/ transcription factor/ transcription regulator3513e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
71  50%

Unigene MembersMember information