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Information for unigene UN06320

FASTA Sequence
Unigene ID: UN06320Length: 1469 SSR 
GGAACCAAAGAACATTTCGAAACCCTAAATCTCCAATAAAGAGTTCGGAACCTTAACGCCGCCATGGCTAAGAAGAGAAAGCTCGA
AGCGCAACTCGCCGAAGCTTCTTCTGAACCGTCGTCGCAGAAGCAGATTGCAACCAACAACAATCAGCTTAATCAGAAAGAGAAAG
AAGTAGAATACGAGGAAGTAGAGGAAGAGCACGAGGAGGAAGTCGAAGAGGACGAAAACGATGATGACGAAGAAGAAGAAGAAGAT
GACAATCGTATGGTGGCGGCGGCGTCGGGATCTGGGAATCATCAAGGAGATGACGACGACGAGGAGCCGATTCAAGATCTGTTGGA
GCCGCGATGTGGCAAGTCGAATCCGCGAAGTGGCCGATGAGGATCCCGTTCATAGGAAGATCTTCGTGCACGGGCTCGGATGGGAT
ACTAAAACCGAGACGCCCATAGAAGCTTTCAAGCAGTACGGAGAGATCGAAGATTGCAAGGCTGTGTTTGATAAGGTCTCGGGGAA
ATCTAAAGGATATGGGTTTATTCTGTTTAAGTCTAGATCAGGTGCTCGTCACGCGCTTAAGCAGCCTCAGAAGAAGATCGGGAGTC
GTATGACTGCGTGTCAGTTAGCTTCTAAAGGACCAGTCTTTGGAGGAAGCAACCCTGTTGCTGCTTCCTCAGGTGCTTCTATTGCT
CCTGCTCAGCATTCCAACTCTGAGCATACTCAGAAGAAGATCTATGTCATTAACGTTGGAGCAGAGCTCGATCTTCAGAAGCTGCT
AGCGTTTTTCTCGAAGTTCGGTGAGATTGAGGAAGGTCCTTTGGGTCTTGATAAGTATACGGGGAGACCTAAAGGCTTCTGTCTCT
TTGTTTATAAGTCAGCTGAGAGCGCCAAGAGGGCTTTAGAAGAGCCGCACAAGACCTTCGAGGGCCACGTCTTGCATTGCCAGAAG
GCCATAGATGGTCCTAAACCTGGCAAGCAGCAGCAACAGTTTAACAGCAATCCTCGTTTCCCGAGGAATGATAACAATGGTGGTTA
CGGTACCCCTACTGGTCATGGACATCTCATGGCTGGTAACCAAGGCGGGATGGGTACTCCAGTTCAAGCGATGAACCCAGCCTTTG
GACAGGCCTTGACAGCTTTGTTAGCAACGCAGGGAGGTTTGGCGTTTAACCCAGCACTTGGGCAGGCTTTGTTGGGTTCGCTGGGG
ACAGCTGCAGGTGTAAACCCAGGGGCTGGAGTTGGAATGCCAACTGGTTATGGAACTCAACCTATGACACCTGGGAGTATTCCTGG
GGTACGGTGGACAACCTGGGTTGCAAGGTGGCTATCAGACCCCTCCACCTGGTCAGGGTGGTACAGGAAGAGGGCAACATGGTGTC
GGGCATTATCCTTACATGGGCCAGTAGATGTATCATGTAGCAACTCAGTTCAGTCAGATGGTTCGGAGCGAAGACTTATCCGTCTC
TCCTGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33737 unnamed protein product [Thellungiella halophila]14111e-153
NP_567042 UBP1-associated protein 2A [Arabidopsis thaliana]13876e-151
AAK68825 putative protein [Arabidopsis thaliana]13876e-151
BAH56834 AT3G56860 [Arabidopsis thaliana]13804e-150
XP_002878114 hypothetical protein ARALYDRAFT_486125 [Arabidopsis lyrata subsp. lyrata]13698e-149

Swiss-Prot top hits (Blast detail)Scoree value
Q99020 Heterogeneous nuclear ribonucleoprotein A/B1543e-009
Q99729 Heterogeneous nuclear ribonucleoprotein A/B1491e-008
Q54F38 Histone H3.v11453e-008
Q76LC6 RNA-binding protein 241453e-008
P10979 Glycine-rich RNA-binding, abscisic acid-inducible protein1444e-008

TrEMBL top hits (Blast detail)Scoree value
Q94B29 Putative uncharacterized protein At3g5686013874e-151
Q9LES2 AT3g56860/T8M16_19013874e-151
C0Z2A5 AT3G56860 protein13803e-150
O80678 At2g41060/T3K9.1710981e-117
B9S7Y1 Heterogeneous nuclear ribonucleoprotein A1, putative10156e-108

Arabidopsis top hits (Blast detail)Scoree value
AT3G56860.3 UBP1 interacting protein 2a (UBA2a)13872e-153
AT3G56860.1 UBP1 interacting protein 2a (UBA2a)13872e-153
AT3G56860.2 UBP1 interacting protein 2a (UBA2a)13872e-153
AT2G41060.1 RNA recognition motif (RRM)-containing protein10988e-120
AT2G41060.2 RNA recognition motif (RRM)-containing protein10988e-120

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  33%
 
62  67%

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