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Information for unigene UN06320
| FASTA Sequence |
| Unigene ID: UN06320 | Length: 1469 |
SSR | | GGAACCAAAGAACATTTCGAAACCCTAAATCTCCAATAAAGAGTTCGGAACCTTAACGCCGCCATGGCTAAGAAGAGAAAGCTCGA
AGCGCAACTCGCCGAAGCTTCTTCTGAACCGTCGTCGCAGAAGCAGATTGCAACCAACAACAATCAGCTTAATCAGAAAGAGAAAG
AAGTAGAATACGAGGAAGTAGAGGAAGAGCACGAGGAGGAAGTCGAAGAGGACGAAAACGATGATGACGAAGAAGAAGAAGAAGAT
GACAATCGTATGGTGGCGGCGGCGTCGGGATCTGGGAATCATCAAGGAGATGACGACGACGAGGAGCCGATTCAAGATCTGTTGGA
GCCGCGATGTGGCAAGTCGAATCCGCGAAGTGGCCGATGAGGATCCCGTTCATAGGAAGATCTTCGTGCACGGGCTCGGATGGGAT
ACTAAAACCGAGACGCCCATAGAAGCTTTCAAGCAGTACGGAGAGATCGAAGATTGCAAGGCTGTGTTTGATAAGGTCTCGGGGAA
ATCTAAAGGATATGGGTTTATTCTGTTTAAGTCTAGATCAGGTGCTCGTCACGCGCTTAAGCAGCCTCAGAAGAAGATCGGGAGTC
GTATGACTGCGTGTCAGTTAGCTTCTAAAGGACCAGTCTTTGGAGGAAGCAACCCTGTTGCTGCTTCCTCAGGTGCTTCTATTGCT
CCTGCTCAGCATTCCAACTCTGAGCATACTCAGAAGAAGATCTATGTCATTAACGTTGGAGCAGAGCTCGATCTTCAGAAGCTGCT
AGCGTTTTTCTCGAAGTTCGGTGAGATTGAGGAAGGTCCTTTGGGTCTTGATAAGTATACGGGGAGACCTAAAGGCTTCTGTCTCT
TTGTTTATAAGTCAGCTGAGAGCGCCAAGAGGGCTTTAGAAGAGCCGCACAAGACCTTCGAGGGCCACGTCTTGCATTGCCAGAAG
GCCATAGATGGTCCTAAACCTGGCAAGCAGCAGCAACAGTTTAACAGCAATCCTCGTTTCCCGAGGAATGATAACAATGGTGGTTA
CGGTACCCCTACTGGTCATGGACATCTCATGGCTGGTAACCAAGGCGGGATGGGTACTCCAGTTCAAGCGATGAACCCAGCCTTTG
GACAGGCCTTGACAGCTTTGTTAGCAACGCAGGGAGGTTTGGCGTTTAACCCAGCACTTGGGCAGGCTTTGTTGGGTTCGCTGGGG
ACAGCTGCAGGTGTAAACCCAGGGGCTGGAGTTGGAATGCCAACTGGTTATGGAACTCAACCTATGACACCTGGGAGTATTCCTGG
GGTACGGTGGACAACCTGGGTTGCAAGGTGGCTATCAGACCCCTCCACCTGGTCAGGGTGGTACAGGAAGAGGGCAACATGGTGTC
GGGCATTATCCTTACATGGGCCAGTAGATGTATCATGTAGCAACTCAGTTCAGTCAGATGGTTCGGAGCGAAGACTTATCCGTCTC
TCCTGTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33737 unnamed protein product [Thellungiella halophila] | 1411 | 1e-153 |
| NP_567042 UBP1-associated protein 2A [Arabidopsis thaliana] | 1387 | 6e-151 |
| AAK68825 putative protein [Arabidopsis thaliana] | 1387 | 6e-151 |
| BAH56834 AT3G56860 [Arabidopsis thaliana] | 1380 | 4e-150 |
| XP_002878114 hypothetical protein ARALYDRAFT_486125 [Arabidopsis lyrata subsp. lyrata] | 1369 | 8e-149 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q99020 Heterogeneous nuclear ribonucleoprotein A/B | 154 | 3e-009 |
| Q99729 Heterogeneous nuclear ribonucleoprotein A/B | 149 | 1e-008 |
| Q54F38 Histone H3.v1 | 145 | 3e-008 |
| Q76LC6 RNA-binding protein 24 | 145 | 3e-008 |
| P10979 Glycine-rich RNA-binding, abscisic acid-inducible protein | 144 | 4e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94B29 Putative uncharacterized protein At3g56860 | 1387 | 4e-151 |
| Q9LES2 AT3g56860/T8M16_190 | 1387 | 4e-151 |
| C0Z2A5 AT3G56860 protein | 1380 | 3e-150 |
| O80678 At2g41060/T3K9.17 | 1098 | 1e-117 |
| B9S7Y1 Heterogeneous nuclear ribonucleoprotein A1, putative | 1015 | 6e-108 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G56860.3 UBP1 interacting protein 2a (UBA2a) | 1387 | 2e-153 |
| AT3G56860.1 UBP1 interacting protein 2a (UBA2a) | 1387 | 2e-153 |
| AT3G56860.2 UBP1 interacting protein 2a (UBA2a) | 1387 | 2e-153 |
| AT2G41060.1 RNA recognition motif (RRM)-containing protein | 1098 | 8e-120 |
| AT2G41060.2 RNA recognition motif (RRM)-containing protein | 1098 | 8e-120 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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