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Information for unigene UN06321

FASTA Sequence
Unigene ID: UN06321Length: 738 SSR 
GGGTAGTTGTAAATGTTTTCTTTATAAGGCTTGTGTAGTACCATCGAAACATAAACCTTCTACTACATTTTTGCTTCTATCTTATA
AGACAGAGGAAGACATGATTTAAAGCTTTTGCTTCTATCTTATTCAAAAAACATAAAACATAAAGCTTCTATCTTGTTTTCCTTTT
ACCACATATTCTCAAATAATTTCAGTTTACCACATTTATTTTCCAAATTCACATTTCTTGCTTCTCACTTTCTTAAATGGCATCTT
CTTCTTCTTCTAATAATATTGAAGACATTATGGATGAACAATTCGACCAATTTTTCGATGAAAAATTTGATCAACTTTTCGATCAA
CGATTCGAAAATCTTTTTAATCGTCATGATCAGCATCAAACCCTAGGGCTCGAGGAACCAGCCATGTCGTCCAAGCAAGGAGGAAA
GGCGAAACCTTTGAAGCAGCCAAAAGCTGATAAGAAGGAATACGATGAGCCGATATGGCCAACCTTCAGAAGAAGAAAGACGAGGA
AAAGGCACTTAAAGAACTAAGAGCCAAGGCATCGCAGAAGGGATCTTTTGGAGGATCTGGTCTTAAGAAGAGTGGCAAGAAATAAT
CCCGTTTTGTATCCATGAAGCCTGTCTTTGACAGAGTGCTTATTTATCAACTTATAATGTTGTGTAACTTCCTATCATATCTGTAG
GGGAGTGACTTTTCCTTATCCCATAACATAACATATGTTTTGCTTTCGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_563969 translation machinery associated protein TMA7 [Arabidopsis thaliana]1873e-012
ABK93446 unknown [Populus trichocarpa]1864e-012
ABK20919 unknown [Picea sitchensis]1802e-011
ACU14388 unknown [Glycine max]1792e-011
ADK13062 conserved hypothetical protein 5 [Hevea brasiliensis]1774e-011

Swiss-Prot top hits (Blast detail)Scoree value
Q4SUE2 Coiled-coil domain-containing protein 721216e-006

TrEMBL top hits (Blast detail)Scoree value
Q9XI42 F9L1.21 protein1872e-012
A9PAP3 Putative uncharacterized protein1863e-012
A9NJV8 Putative uncharacterized protein1801e-011
C6SYR5 Putative uncharacterized protein1792e-011
A9NWF5 Putative uncharacterized protein1764e-011

Arabidopsis top hits (Blast detail)Scoree value
AT1G15270.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Translation machinery associated TMA7 (InterPro:IPR015157); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16040.1); Has 263 Blast hits to 263 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 48; Plants - 41; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).1881e-014
AT3G16040.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Translation machinery associated TMA7 (InterPro:IPR015157); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15270.1); Has 264 Blast hits to 264 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 48; Plants - 41; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).1772e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  67%
 
121  33%

Unigene MembersMember information