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Information for unigene UN06339

FASTA Sequence
Unigene ID: UN06339Length: 1368 SSR 
GGGTCGAGTCTCGAGAAGGTTCTTTCTTTCATCGTCCTCGCGGAGAATTTTTGCATAAAGGGTTCAAAGAATACTCCATCAAAAAC
GATAAATTTATCGACTTTTGAAGTTTATAATATTGCAGATTTACTTGCTGTTGTTCAAAGGGAAGATGCAAGGAGGTGGTAGAGAT
CCTTTCAACTTTGGTGGTGGCCCTTTTGGAAGCCCTTTTGGTGGTGGCCCTAACAATGGACCTCGGAATCTCATGTCTAGCTTTTT
CGGAGGAAGAGATCCGTTTGATGACCCTTTCTTCACCCAGCCTTTTGGTGGTGGTGGCGGTGGCATGTTTCAGTCCAACTTCTTTG
GTCCTGGTCCTAACATGGATCCTTTTGCTGGAATGCGTCCTCCATCAGGTTTTCTCGAGAATCATCATCATCATCATCAACAGCTA
CCACAACCGAGAAGGTCTCACGGACCGGTTATCGAAGAGATTGATTCAGATGATGATGAGAAAGAAGGAGATGGAGTCCAAGAGCA
GAGAGTAAGGCTAGGCAAACATGGCAGGTCAAGCAGTGAGATTGAAACCGAAGAAGCTAGAGCTGAAGAGAGAAGGAACAGACAAA
TGCAAAACATGAATGTAAGTGCTGCTATGGCGAACAATGGACAGTGGCAACCACAGACTCGTGGTTACAGTTTCCAGAGCTCCACT
GTTACATACGGTGGTCATGACGGAAACTACTATACTTCATCCAAGACCAGAAGGACAGGAAGTGATGGGTTAACTCTTGAAGAAAG
CAAAGAAGCTAATACCGCAACACGCGAAGCAGCGCATAGGATTTCAAGAGGCTTACATAACCAGGGCCACACAGTTGCGCGTAAAC
TTAACTCAGATGGTCGGGTTGATACAACGCAGACCTTGCACAATTTAAATGAAGGTAGAGTTAACACTTTGTGGAATGGATGATAG
AACCTGCAAAATTCAGACCGTTTCTTTTATCTTTCTTGCTTTTTAATTTGCAAAAAATTCTGCAGATGAGTTGGCTGATTTTGAGC
AGACTTGGAGTGGAAATGCTAGAATGCAGTTACCTGGTTGGTCTGATTCCTTTGGCAGTGGTCTTGTAAACAGAGAGCAACCAATG
TCGCTTCCTTCAACTGATCCAAGCTCTTCTTCACGTGCAAGAGCAGAGTCATCCAGAAGAACAAATGCTGCAATGAATGTTAGAGG
ACAGGGCAGAAACTAAACTCTTAGGACTATCATGTCCTGTTAGTGAATGCAATAACCAAAGACTATTATCTACTTTACTTAGGGGT
GCATCGTCACTGTAAGCCCTGTATGATGACATGATTTGAGGCTTTTATGATAAAATGGTATATGCATGTTTTTTAATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867755 hypothetical protein ARALYDRAFT_914337 [Arabidopsis lyrata subsp. lyrata]9225e-097
XP_002509615 conserved hypothetical protein [Ricinus communis]6554e-066
XP_002304437 predicted protein [Populus trichocarpa]6188e-062
XP_002437774 hypothetical protein SORBIDRAFT_10g002370 [Sorghum bicolor]5301e-051
NP_001060865 Os08g0117900 [Oryza sativa Japonica Group]5255e-051

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
B9RBT1 Putative uncharacterized protein6553e-066
O49655 Predicted protein6222e-062
B9GVS8 Predicted protein (Fragment)6186e-062
C6T9A6 Putative uncharacterized protein5721e-056
C5Z3E7 Putative uncharacterized protein Sb10g0023705309e-052

Arabidopsis top hits (Blast detail)Scoree value
AT4G22740.1 glycine-rich protein9231e-099
AT4G22740.2 glycine-rich protein9231e-099
AT2G45380.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: calcium ion binding (TAIR:AT4G34070.1); Has 72 Blast hits to 71 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 15; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).3397e-032
AT2G45380.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G22740.2); Has 48 Blast hits to 48 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).2761e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  100%

Unigene MembersMember information