Information for unigene UN06348
| FASTA Sequence |
| Unigene ID: UN06348 | Length: 1412 |
SSR | | GGGAACGAGCACTGTGTTTGAGGAAGCTGAGAGTATCTCGGTGGGGGAACTGATAAAGAGTCCTGTTTTCAGTGAAGATGAGTCGA
CGGATAGCCAGCTGTGGATCGATTTGGGTCAGAGTCCTGCTGATTCTGATAACAAGCAGAAGAGCCCTTTACTTGTGGTTCCACAA
AACCACAAACGAAGGATCTCGCCTAAACCAGGTTCGAAGGCTAGTAATGGTAGTAACGGTGGGAGACATGTTCTCTCTTTTGATGC
TGCTGTTTTGTCGGTATCACAAGAAGTAGCTGAAGTAGACACTAGTCATGGGTTGAGAGTTAGTGAGATTGAAGAAGAAGAAGAAG
ATGAAGGGAGGAGGAGTAAGATGATTTCTCAAGGAAATGGTTCTTCAACCTCTGGAATTAAAGAGAGTGCGATAAGAAGAGAAACA
GGAGGCGAGTTTAGACTGTTAGGGAGAAGGGAGAAGAGTCAGTATAACGGTGGGAGGCTTGTTGTGAACGAAGGTGAGCATCCCAG
TAAACGAAGAGTATCTTTTAGATCAGTAGATCACGGAGGAGAATCATCAGTGATCAGATTGAGGACGAAGAAGAAGAAGAAGATGA
TGATGATGATGAAGAAGAAGATGGAAGCAATGGAGTAGAATGGGATGATGAACAGAGAGAACCAGAGATTGTTTGCCGCCACATAG
ATCATGTGAACACGTTAGGTCTCAACAAGACCACCTCGAGACTCAGGTACCTCATTAACTGGCTTGTGACTTCTCTGCTCCAGCTA
AGGCTGCCTAGATCAGACCCCGGTGGAGAGCACAAGAATCTTGTCCAAATCTACGGTCCAAAGATCAAATACGAGAGAGGATCTTC
CGTGGCGTTTAACGTGAGGGATCTGAAGAGTGGGATGGTTCATCCTGAGGTAGTGCAGAAACTAGCTGAGAGAGAAGGTATATCTC
TAGGCATTGGTTACCTCAGTCACATAAAGATCGTGGATAATCGAGGAGGCGAAGATTCGAGTTCTTGGAAACCAGATGGAAGAAAC
AGCAACGGTTTCATCAGAGTTGAAGTTGTCACTGCTTCACTTGGGTTCTTGACGAACTTCGAAGATGTTTACAGATTGTGGAGTTT
CGTGGCAAAGTTCTTGAGTCCGGGTTTTGCTAAACAGGGGACACTCCCAACAGTTGTTGAAGAAGATGACTCTTCAGAAACTTAGA
AGAAGAAGAAGAAATTGAGGAATGAATACATTTTGTTTTTTGCTACACTTTCCTTTACTGTACTTATCGGAGAACATTCTCATGTA
TGATTCTGGCAAGTTTATGTGAACAGAGACGATCTCAGAGACAAGTTTTCTGCATATTGTAACTGTTCATTTATTTTGTGTCTTTG
TGTCACACAATTCATTGATTCATACCTTCATTTGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_201496 catalytic/ pyridoxal phosphate binding protein [Arabidopsis thaliana] | 952 | 2e-100 |
| XP_002866724 hypothetical protein ARALYDRAFT_496904 [Arabidopsis lyrata subsp. lyrata] | 939 | 5e-099 |
| NP_195427 catalytic/ pyridoxal phosphate binding protein [Arabidopsis thaliana] | 664 | 4e-067 |
| XP_002869008 hypothetical protein ARALYDRAFT_912653 [Arabidopsis lyrata subsp. lyrata] | 659 | 2e-066 |
| CAN75833 hypothetical protein VITISV_039637 [Vitis vinifera] | 646 | 5e-065 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FGD5 Emb|CAB16785.1 | 952 | 1e-100 |
| O23176 Putative uncharacterized protein AT4g37100 | 664 | 3e-067 |
| B9HEF2 Predicted protein | 658 | 1e-066 |
| A5AMA2 Putative uncharacterized protein | 646 | 3e-065 |
| C5WZA1 Putative uncharacterized protein Sb01g007060 | 577 | 3e-057 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G66950.1 catalytic/ pyridoxal phosphate binding | 953 | 5e-103 |
| AT4G37100.1 catalytic/ pyridoxal phosphate binding | 664 | 2e-069 |
| AT2G23520.1 catalytic/ pyridoxal phosphate binding | 650 | 6e-068 |
| AT5G51920.1 catalytic/ pyridoxal phosphate binding | 304 | 8e-028 |
| AT4G22980.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: catalytic/ pyridoxal phosphate binding (TAIR:AT5G51920.1); Has 294 Blast hits to 268 proteins in 91 species: Archae - 4; Bacteria - 15; Metazoa - 79; Fungi - 66; Plants - 107; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). | 175 | 8e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Software error:
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