Information for unigene UN06353
| FASTA Sequence |
| Unigene ID: UN06353 | Length: 954 |
SSR | | TTTTTGTGCTCTCAAGTAGCTCTCTCTCTCTCTCTCTCTCTCACTTGTATTCGAGATTCAGCTGTCAAAACCCTAACCAGCGCCAT
AGCTTAGCGAGGTTCCCTGATTGAGAGGGCGAGAACAAGAGAATCGTCTCTCTCGATTTTCTGGTTAATCGTCGTTTTTTCTTCAG
GAGTAAAGTAAGCTATGGCGATGTTAGGTGCACAGCAAGTTCAAACAGCAGCTTGTACTCCAGATCTTGTTGGGAATGCATTTGTG
CATCAGTATTACCACATTTTGCATCACTCCCCTCAGCATGTTCACCGATTTTACCAAGACATTAGCAAGTTAGGCCGCCCTGAAGA
TAATAATGGTACAATGAGCATCACTTCTACCTTGCAAGGTATTGACAAGAAGATACTGGCACTTGGAGATGGTGTAATCGGTGCCG
AGATTGCAACTGTTGACACACAAGACTCTTACGGCGGTGGTTTTCTCCTACTGGTGACTGGGTATCTGACGGGGAAAGATGGTGTG
AGGAGGACGTTTACTCAGACCTTCTTCCTTGCTCCACAGGAGAATGGATACTTTGTTTTGAATGATATGTTCCGATACATTGATGA
AGCCACAATCGTGAATAACATCCAAGTTCCTGTCAACGTTCACCAGGATCCACCTGCTACTCAAGACATTCCAGTTCAGGAGACAT
ATGTCCAAGAGAATCATGCTGTTGAGCAGTCTGATGTGTTGTCGAAGAGCATTAATGGTCCTGAAGTGTTCGCTCCCACTGAAGAG
GAACTGATATCAGTGACAGAAGACGCTCCTGCGCCTGGAATAGTTCATGAAGCTCCAATTGATGTTCAGAAGTTGGAGAGTCTGAT
TCTAGACCGGCGAAGTTCCAAAGATATCTTATGCATCCATTGTGATGGTTATGAAGAGATGCTGCACCGATGTCTGCTTCGAGACT
CCACTAGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002863091 nuclear transport factor 2 family protein [Arabidopsis lyrata subsp. lyrata] | 872 | 2e-091 |
| NP_001189969 nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] | 832 | 8e-087 |
| NP_189151 nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana] | 828 | 2e-086 |
| BAB02073 RNA-binding protein-like [Arabidopsis thaliana] | 750 | 2e-077 |
| XP_002532732 RNA binding protein, putative [Ricinus communis] | 563 | 1e-055 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VYJ4 AT3g25150/MJL12_9 | 828 | 2e-086 |
| Q9LSG2 RNA-binding protein-like | 750 | 2e-077 |
| B9T3B3 RNA binding protein, putative | 563 | 8e-056 |
| B9GQM2 Predicted protein (Fragment) | 500 | 2e-048 |
| C6TNY8 Putative uncharacterized protein (Fragment) | 494 | 8e-048 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G25150.1 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein | 828 | 9e-089 |
| AT5G60980.1 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein | 372 | 7e-036 |
| AT5G60980.2 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein | 372 | 7e-036 |
| AT5G48650.1 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein | 319 | 9e-030 |
| AT1G13730.1 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein | 287 | 5e-026 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Software error:
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