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Information for unigene UN06353

FASTA Sequence
Unigene ID: UN06353Length: 954 SSR 
TTTTTGTGCTCTCAAGTAGCTCTCTCTCTCTCTCTCTCTCTCACTTGTATTCGAGATTCAGCTGTCAAAACCCTAACCAGCGCCAT
AGCTTAGCGAGGTTCCCTGATTGAGAGGGCGAGAACAAGAGAATCGTCTCTCTCGATTTTCTGGTTAATCGTCGTTTTTTCTTCAG
GAGTAAAGTAAGCTATGGCGATGTTAGGTGCACAGCAAGTTCAAACAGCAGCTTGTACTCCAGATCTTGTTGGGAATGCATTTGTG
CATCAGTATTACCACATTTTGCATCACTCCCCTCAGCATGTTCACCGATTTTACCAAGACATTAGCAAGTTAGGCCGCCCTGAAGA
TAATAATGGTACAATGAGCATCACTTCTACCTTGCAAGGTATTGACAAGAAGATACTGGCACTTGGAGATGGTGTAATCGGTGCCG
AGATTGCAACTGTTGACACACAAGACTCTTACGGCGGTGGTTTTCTCCTACTGGTGACTGGGTATCTGACGGGGAAAGATGGTGTG
AGGAGGACGTTTACTCAGACCTTCTTCCTTGCTCCACAGGAGAATGGATACTTTGTTTTGAATGATATGTTCCGATACATTGATGA
AGCCACAATCGTGAATAACATCCAAGTTCCTGTCAACGTTCACCAGGATCCACCTGCTACTCAAGACATTCCAGTTCAGGAGACAT
ATGTCCAAGAGAATCATGCTGTTGAGCAGTCTGATGTGTTGTCGAAGAGCATTAATGGTCCTGAAGTGTTCGCTCCCACTGAAGAG
GAACTGATATCAGTGACAGAAGACGCTCCTGCGCCTGGAATAGTTCATGAAGCTCCAATTGATGTTCAGAAGTTGGAGAGTCTGAT
TCTAGACCGGCGAAGTTCCAAAGATATCTTATGCATCCATTGTGATGGTTATGAAGAGATGCTGCACCGATGTCTGCTTCGAGACT
CCACTAGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863091 nuclear transport factor 2 family protein [Arabidopsis lyrata subsp. lyrata]8722e-091
NP_001189969 nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana]8328e-087
NP_189151 nuclear transport factor 2 and RNA recognition motif domain-containing protein [Arabidopsis thaliana]8282e-086
BAB02073 RNA-binding protein-like [Arabidopsis thaliana]7502e-077
XP_002532732 RNA binding protein, putative [Ricinus communis]5631e-055

Swiss-Prot top hits (Blast detail)Scoree value
O94260 Putative G3BP-like protein2033e-015

TrEMBL top hits (Blast detail)Scoree value
Q8VYJ4 AT3g25150/MJL12_98282e-086
Q9LSG2 RNA-binding protein-like7502e-077
B9T3B3 RNA binding protein, putative5638e-056
B9GQM2 Predicted protein (Fragment)5002e-048
C6TNY8 Putative uncharacterized protein (Fragment)4948e-048

Arabidopsis top hits (Blast detail)Scoree value
AT3G25150.1 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein8289e-089
AT5G60980.1 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein3727e-036
AT5G60980.2 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein3727e-036
AT5G48650.1 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein3199e-030
AT1G13730.1 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein2875e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  75%
 
121  25%

Unigene MembersMember information