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Information for unigene UN06355

FASTA Sequence
Unigene ID: UN06355Length: 752 SSR 
GGAGAGAAAACCCTCAACAGAGAGAGAGCGAGAGAGAAGTGTAGATTCTAGATTGAGAGAAGAGAGAGAGAGAGATGGCAGACGAA
GGTAAAGACGAGGCGGGAATGGATCAGGTAGAGGAGGATTTCTCAATATGGAAGAAGAACACACCATTCCTCTACGATCTTATGAT
CTCCAACCCTCTCGAATGGCCCTCTCTCACCGTCCACTGGGTCCCATCCCCTCCGTCTCCTTACGCCGCGGATCCTTACTTCGGCG
TCCACAAGCTCATCCTCGGAACCCACACTTCCGGCGACGCTCAAGATTTCCTCATGGTCGCCGACGCCGTCATCCCAACTCCCGAC
GCCGAGCCTGGGCTAGGCGGCACAAATCAAGATCCCATCGTCCCTAAGGTGGAGATTAGGCAGAGAATACGTGTCGATGGAGAAGT
GAACAGAGCGCGGTGCATGCCTCAGAAGCCAACTCTCGTCGGCGCCAAGACAAGTGGGTGTGAGGGTGTTTCTGTTTGATTACGCC
AAACATGCTTCGAAGCCTTCTCAGACGAGTGATTGTGATCCTGATCTGAGGCTGCTTGGACACGACATGGAAGGGTATGGATTGTC
TTGGAGTCCCTTCAAGGAAGGTTATCTTCTGAGTGGTTCGCAGGATAAGAGATATGCCTTTGGGATGTTTCAGCTACACCGCAAGA
TAAGGTTCTGATGCAATGTTTGTGTATGAGGGACATGATGCGCTGTGGAGATGTAGCGTGCACA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886076 hypothetical protein ARALYDRAFT_480561 [Arabidopsis lyrata subsp. lyrata]7242e-074
AAM65591 putative WD-40 repeat protein, MSI2 [Arabidopsis thaliana]7099e-073
NP_179269 histone-binding protein RBBP4 [Arabidopsis thaliana]7072e-072
NP_195231 histone-binding protein RBBP4 [Arabidopsis thaliana]6731e-068
AAB70244 WD-40 repeat protein [Arabidopsis thaliana]6731e-068

Swiss-Prot top hits (Blast detail)Scoree value
O22468 WD-40 repeat-containing protein MSI27077e-074
O22469 WD-40 repeat-containing protein MSI36736e-070
O22466 WD-40 repeat-containing protein MSI12004e-015
O22467 WD-40 repeat-containing protein MSI11971e-014
Q24572 Probable histone-binding protein Caf11817e-013

TrEMBL top hits (Blast detail)Scoree value
Q8LA40 Putative WD-40 repeat protein, MSI27096e-073
Q5HZ33 At4g350506739e-069
Q84WQ9 Putative WD-40 repeat protein (MSI3)6712e-068
A0SEK9 Putative retinoblastoma binding protein5521e-054
B9T851 Retinoblastoma-binding protein, putative4766e-046

Arabidopsis top hits (Blast detail)Scoree value
AT2G16780.1 MSI2 (MULTICOPY SUPPRESSOR OF IRA1 2)7077e-075
AT4G35050.1 MSI3 (MULTICOPY SUPPRESSOR OF IRA1 3); protein binding6736e-071
AT5G58230.1 MSI1 (MULTICOPY SUPRESSOR OF IRA1); protein binding3001e-027
AT2G19520.1 FVE; metal ion binding1557e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
81  50%

Unigene MembersMember information