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Information for unigene UN06368

FASTA Sequence
Unigene ID: UN06368Length: 764 SSR 
GGGCTCAATCACCATCTCAGCACTAGCTTCAACAACAACAACAAGAACCCTCCGTTTCAGAGAGCAGCTTCTCACATCTCCGAAGC
TCTCCTCTCGCTCGGAGCACCAACACAACCCTTACTCACCCCCGAGAATCTCATCCTCAGAATCGCAGCTTACAGAGCCTTCTCCG
AAACGTCGCCGTTTCTCCAGTTCGTCAACTTCACAGCCAACCAATCGATCCTCGACTTAGGCTTCGACCGGATCCACATTATCGAT
TTCGACGTCGGATACGGAGGACAGTGGTCGTCTTTAATGCAGGAGCTTGCGAGAAACAGAGGTTCGTCTCTGAAAGTAACGGTCTT
CGCTCCTCCTCCGTCGACGGTCTCCGACGAGTTCGAGCTCAGGTTCACGGAGGAGAATCTCAGAAGCTTCGCCGGAGAACTCAAGA
TTCCGTTTGAAATGGAGCTGCTGAGCCTCGAGCTTCTTCTGAACCCAGCTTACTGGCCTCTCTCTCTCCGTTCGTCGGAGAAAGAA
GCTGTCGCGGTGAACCTTCCTATAAGCTCCGTTGTCCCCGGTTACCTTCCGTTAATCCTCCGTTTTCTCAAACAGATATCTCCAAA
CGTCGTCGTTTGCTACGACAGAGGATGTGACCGCAACGACGCGCCGTTTCCTAACGCTGTGATCCACGCGCTTCAGTACCACACCA
CTCTCCTTGAGTCTCTCGACGCCATCAAAGCCAGAGGATCGAGTGTTGAGAGGTTTGGGTGCAGCCTCTATCGAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002881998 hypothetical protein ARALYDRAFT_483651 [Arabidopsis lyrata subsp. lyrata]9912e-105
XP_002878344 scarecrow transcription factor family protein [Arabidopsis lyrata subsp. lyrata]8504e-089
NP_191622 scarecrow-like protein 22 [Arabidopsis thaliana]8479e-089
NP_182041 scarecrow-like protein 27 [Arabidopsis thaliana]6363e-064
AAO42084 putative SCARECROW gene regulator [Arabidopsis thaliana]6363e-064

Swiss-Prot top hits (Blast detail)Scoree value
Q7XJM8 Scarecrow-like protein 2710123e-109
Q9M000 Scarecrow-like protein 228474e-090
O81316 Scarecrow-like protein 65591e-056
Q8GVE1 Chitin-inducible gibberellin-responsive protein 21988e-015
Q9S7H5 Scarecrow-like protein 211871e-013

TrEMBL top hits (Blast detail)Scoree value
B7ZWR8 At2g4516010125e-108
B9GPD0 GRAS family transcription factor6074e-061
B9P6C8 GRAS family transcription factor5994e-060
B9RD72 Putative uncharacterized protein5913e-059
B9MUX1 GRAS family transcription factor5887e-059

Arabidopsis top hits (Blast detail)Scoree value
AT2G45160.1 scarecrow transcription factor family protein10123e-110
AT3G60630.1 scarecrow transcription factor family protein8538e-092
AT4G00150.1 scarecrow-like transcription factor 6 (SCL6)5591e-057
AT2G04890.1 SCL21 (SCARECROW-LIKE 21); transcription factor1871e-014
AT1G50600.1 SCL5; transcription factor1852e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  50%
 
121  50%

Unigene MembersMember information