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Information for unigene UN06376

FASTA Sequence
Unigene ID: UN06376Length: 931 SSR 
AAAAGGTTTTTGACCAAACAGAAAGGCGTCGAGCAGAAGGAAGAATAAAAATTGGATCTTTTCGTAAGGGGAAGGAAGGTTAGTGC
CGAAATTAATAGCAACGCTTCCAAAAATATTGATGAAAGCTCCGATGACCCACTCTCCCATAATGTTTTTAATGAATCAATTAAAG
GATCATCTAAAAAGCTGCAAACTTTGGAGCAAACACAAAGCTCAGGCTCTCATGTGATCTTATTAAGCCTTCGAAATATTTGAAGA
GGCAACACCTGCGAGGAGACGGTAGAGAAGAGCTTCTTCTTCTTCTTCTTCTTCTTCAGATCCAGATTGGTTCTCTAAAAGCAGAG
CAGATTACAAGTCCTCCTCTCCCAACAAGAAAATGAAACTATTTTTTTTTTTTTTTAAAAGGTTTTTGACCAAACAGAAAGGCGTC
GAGCAGAAGGAAGAATAAAAATTGGATCTTTTCGTAAGGGGAAGGAAGGTCCCAATTTGAGAAGGTTAGTGCCGAAATTAATAGCA
ACGCTTCCAAAAATATTGATGAAAGCTCCGATGACCCACTCTCCCATAATGTTTTTAATGAATCAATTAAAGGATCATCTAAAAAG
CTGCAAACTTTGGAGCAAACACAAAGCTCAGGCTCTCATGTGATCTTATTAAGCCTTCGAAATATTTGAAGAGGCAACACCTGCGA
GGAGACGGTAGAGAAGGGCTTCTTCTTCTTCTTCTTCTTCTTCAGATCCAGATTGGTTCTCTAAAAGCAGAGCAGATTACAAGTCC
TCCTCTCCCAACAAGAAAATGAAACTATTTTTTTTTTTTTTTAAAAGGTTTTTGACCAAACAGAAAGGCGTCGAGCAGAAGGAAGA
ATAAAAATTGGATCTTTTCGTAAGGGGAAGGAAGGTCCCAATCGCCGAGAGAAATTTCCCAACGACGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_189301 uncharacterized protein [Arabidopsis thaliana]1453e-007
XP_002863735 hypothetical protein ARALYDRAFT_917443 [Arabidopsis lyrata subsp. lyrata]1453e-007
XP_002876986 hypothetical protein ARALYDRAFT_484434 [Arabidopsis lyrata subsp. lyrata]1453e-007
XP_002320397 predicted protein [Populus trichocarpa]1427e-007
XP_002512799 pentatricopeptide repeat-containing protein, putative [Ricinus communis]1427e-007

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8RWF4 At3g266701452e-007
B9IA27 Predicted protein1425e-007
B9RGU0 Pentatricopeptide repeat-containing protein, putative1425e-007
C6TK29 Putative uncharacterized protein (Fragment)1409e-007

Arabidopsis top hits (Blast detail)Scoree value
AT3G26670.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: permease-related (TAIR:AT3G23870.1); Has 715 Blast hits to 711 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 298; Fungi - 244; Plants - 119; Viruses - 2; Other Eukaryotes - 52 (source: NCBI BLink).1451e-009
AT3G26670.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: permease-related (TAIR:AT3G23870.1); Has 715 Blast hits to 711 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 298; Fungi - 244; Plants - 119; Viruses - 2; Other Eukaryotes - 52 (source: NCBI BLink).1451e-009
AT3G26670.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: permease-related (TAIR:AT3G23870.1); Has 715 Blast hits to 711 proteins in 119 species: Archae - 0; Bacteria - 0; Metazoa - 298; Fungi - 244; Plants - 119; Viruses - 2; Other Eukaryotes - 52 (source: NCBI BLink).1451e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information