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Information for unigene UN06393

FASTA Sequence
Unigene ID: UN06393Length: 1276 SSR 
AAAGATTCTGCATATTGTTGTTACATTTATTTACAGTTGAAGCAAATGAATATTTTCAATATTCCTAAAGAATTAAAATAGTGTTT
ACAAATTTACAGAGGAGTGATTTTTTTCTCCTCTATATGGAATGAACATCAATGGGTTTATATATATGGAAATGAAGTGCAAAGAA
AGGTTGATTTGTAACACACACACAAGTCATCATCAAGGATCTGCTTTTCCAGAGATTTCATCGTTGTCATCCGAGTCTGAACCACG
TTCGCTCATGCTATCATCATCATCGTCATCTTCATCATCACTTAAATCCTCAGGTGCTCCTATGTCCTCTGGTTTAGCATATGCTT
TGCAGTACTCTTTGACTTTCTTCTCATAGGCTGCACGGTCTCGCATCAAGAGAGAGGCAGCTTCTCCATTGAATGGATCAGATGGG
TTTGGATATAGAAGCAGTTGAGGAAGAAATGACTCGAAGACATTGATAAGATCTGATAAAAACAAACAGAGAAAGTTTTAAAGGAT
GCAATACAATACAATCAAATCATAAGGCATTCAAAAATATATATTACCAAACATTGGGCTCCATGTCTGGTTTATTACATCTAAGC
AAACAGCACCCGAACTGCCACAAAACATTAAAAGCATATATAGTTTTAGATATGCGCGAGATAGATCCTCAACATTTTGAAAATGA
TAAGAGATATATTATTGGTGACTTACGATTCATCAACATTGGGGTGATAAATCTTGTTAACGAAACCAACAGAAGGAGATTTGTAA
GGATAAGCTTCAGGAAGTTCGACTTTGATCTTCCATACACCTCCCTCATATAGACCTTCAAACACACACACATAACAACAACAATA
AAGATAGGGACACTTAAAAGACTTTCATTTACTAACTAGAGAATTCATATATCAAAATTATAATATAATCTTAATTCAGTTCATGG
TGAATATAAAGACCAAATCTACGGAAGACTCTTCTTCTTATTATTTGTTTTGTTCGCAAAGGCATTTCAACGAGTAGGTTGGTTAT
AAGCACAAACAACAAGACAAAAGAGACAGAGGGGATTACTGTCAGTGGGGCCATGGAAAGTAACATAGAACATCTGCAAATCGTCG
TTGACAGTATCCACCTTGTAATCACTCATCATCAATTTCATCATGTCCATCTCTCGGCGTTTGCTCGGCGAAGCCATGCCCCCCGA
TGATTCTTCTCCCTTCCTTCTTCTTCTTCTTCTTTCTAGATTCTGGTTTCAAAGAGAGAGAGAGAGAGAGAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882046 ubiquitin-conjugating enzyme 6 [Arabidopsis lyrata subsp. lyrata]3671e-032
NP_566062 ubiquitin-conjugating enzyme E2 6 [Arabidopsis thaliana]3176e-027
CAA50503 ubiquitin carrier protein [Arabidopsis thaliana]3122e-026
XP_002868603 hypothetical protein ARALYDRAFT_493844 [Arabidopsis lyrata subsp. lyrata]2971e-024
NP_001132171 hypothetical protein LOC100193596 [Zea mays]2934e-024

Swiss-Prot top hits (Blast detail)Scoree value
P42750 Ubiquitin-conjugating enzyme E2 63173e-028
P42748 Ubiquitin-conjugating enzyme E2 42814e-024
P16577 Ubiquitin-conjugating enzyme E2-23 kDa2743e-023
P42749 Ubiquitin-conjugating enzyme E2 52672e-022
Q9P7R4 Ubiquitin-conjugating enzyme E2 82001e-014

TrEMBL top hits (Blast detail)Scoree value
B4FFL4 Ubiquitin carrier protein2933e-024
C4J3D2 Ubiquitin carrier protein2933e-024
B9RCE6 Ubiquitin carrier protein2906e-024
B8BH65 Ubiquitin carrier protein2881e-023
Q337R4 Ubiquitin carrier protein2881e-023

Arabidopsis top hits (Blast detail)Scoree value
AT2G46030.1 UBC6 (ubiquitin-conjugating enzyme 6); ubiquitin-protein ligase3602e-034
AT5G41340.1 UBC4 (UBIQUITIN CONJUGATING ENZYME 4); ubiquitin-protein ligase2869e-026
AT1G63800.1 UBC5 (ubiquitin-conjugating enzyme 5); ubiquitin-protein ligase2671e-023
AT1G16890.1 ubiquitin-conjugating enzyme, putative1263e-007
AT1G78870.2 UBC35 (UBIQUITIN-CONJUGATING ENZYME 35); protein binding / ubiquitin-protein ligase1263e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

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