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Information for unigene UN06403

FASTA Sequence
Unigene ID: UN06403Length: 1027 SSR 
GCGCACGGGTACAAGCTCTAGTTTGTATCTTATTACTCATTAATTACATAATGGTCCTAAAAAAAAAAGGATTTGCAGTTAAATCC
TCTAATTTTACCAAAAAATAAAAAAACCCTGTTTGTATTTGTATTTTTTTTTGTTCCCCCCTGTTTGTATTTGTATATCACACCAT
CATTCATTAGGCTTTCAAGGATTCCTACCAAACTGGATTATAATTGGTTTTCCTTTGAGCACAAAACCATTTACAAAATTCAAAGC
ACGATGTGCGACTTCAACTGATGGAAATGACAAAAAAGCTTGTCCTCTCATTCTTCCTTCCTGCATCAGCCTCACACCAAGACTAT
GAGTTGTGAAACTAAACCGGACTAAATTCTGGAGTCAAATATTCGAACCAGTTAAACCGAAATCTCCATTTGAGCTGAAACGACGG
TGCTTTGTAGGAGGTAGTATTGAGTTAAAGCCTGTGGGCTTTTTCATGTGTGGCCCATTAGGATACTCTTGGTCAGAAGGAAGGAT
TTCCAAGTGGCTCGGACAACTAATTAAAAATTCCGACACAAAACCCAACCCGGATCCGACCCGACAGCAACAGACAACTCCTCTTC
CACGATCTCCTTCTCCAAATTCAGTTCCACCAAAAAGAAGAGAAGATCCAAAACAAAGCAGAGAGACTAAAGAAGATGTCGCTGAG
GCCGAGCACACGCGCAGAGCTGAGGAAGAAGATATACAAGACAGGTGTCGAGGCCAATGAAACGAGGCGGAGGAGAGAGGACAACC
TCGTCGAGATCAGAAAAAACAAGCGCGAGGACAGTCTCCTCAAGAAACGCCGAGAAGGGATGATGATCCAGCAGCAGCAGCAGCAG
CCTCTCGGAGGAGCTGGTCTCGACGCTCTCCAGAGCGATCAGTTTCCGCAGGAGCGTCCTTGGATTCCTCTTCTTCTTTCTTCTTC
TCAATCTCATCGAAAGCTGCTTTCTCCGCATCCTTGAGCTTGCCCCATGTTTCATCTGCCAACTTCTTGGCATAGTCTGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABO21639 importin alpha-like protein [Brassica napus]3264e-028
XP_002889740 hypothetical protein ARALYDRAFT_888168 [Arabidopsis lyrata subsp. lyrata]2881e-023
NP_172398 importin alpha isoform 4 [Arabidopsis thaliana]2871e-023
ACU56981 importin alpha [Citrus sinensis]2557e-020
AAK38726 importin alpha 1 [Capsicum annuum]2512e-019

Swiss-Prot top hits (Blast detail)Scoree value
Q38858 Calreticulin-22178e-017
O04151 Calreticulin-12042e-015
O22478 Importin subunit alpha2007e-015
Q71VM4 Importin subunit alpha-1a1944e-014
Q96321 Importin subunit alpha-11944e-014

TrEMBL top hits (Blast detail)Scoree value
A4GKK5 Importin alpha-like protein3263e-028
O80480 AT1G09270 protein2879e-024
C8CPS0 Importin alpha2555e-020
Q94KB0 Importin alpha 12511e-019
B9I6Q2 Predicted protein2474e-019

Arabidopsis top hits (Blast detail)Scoree value
AT1G09270.1 IMPA-4 (IMPORTIN ALPHA ISOFORM 4); binding / protein transporter2875e-026
AT1G09270.2 IMPA-4 (IMPORTIN ALPHA ISOFORM 4); binding / protein transporter2875e-026
AT1G09230.1 RNA recognition motif (RRM)-containing protein2445e-021
AT1G09210.1 calreticulin 2 (CRT2)2177e-018
AT1G56340.1 CRT1 (CALRETICULIN 1); calcium ion binding / unfolded protein binding2042e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information