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Information for unigene UN06408
| FASTA Sequence |
| Unigene ID: UN06408 | Length: 917 |
| SNP | ATCCACACAGCAATAAACAACTCTTATTATTTTTCCTTAGTTGCTCACAAAGAAACGTACGCAGGAAAATATATGATCAAACTGAG
TCGATACAAATTTTCGTAAAAACGGATACGGCAAAGATGGTAAATAAAGACTTAACAGAGTGTGATTAAGTTTACAAGACATGCAT
ACCAAAGCAATCATTCTCCACATGCATACTCTCTTTATTGCAGGCCAAGTTTATTTATAGATCATGTTTCTTTAGAACCAAGAGGG
AGAGAGAGAGCTCTCTAAGCAGAGGCGTTAACGGCTTTGTTCACGAAGTTATCAACATATTCTTTCCTTGCAGGAAGATGGTCGTG
TGGACGATTGTATGGTGTCCACACCGGTTCACCCACGAAAAGACGCATTGCCTTGATATAGTTGTCAGAATCCACGGTGAAGCGAT
GATAAATTCCAGCAGGTAAGACTATCATTCCTCCCTTCTTCACCCAAACTCTGATCCAAGCTTCGTTGCGGTCCCTCACATCAAAG
TAGCCACTTCCTGCAACGCAGTAACGGATCTCTTCATCAGTGTGAAGATGTTCCTCGAAAAAGCTCTTAACTTTCTCTTCATAATT
TTGAAGCTTCTCAGGGCATACCTCACAGAAGTCCATGTAGGAGTAACCACGAGAGTCGCGGATCTTTTTCAACTCCTCGTCGGTTT
CGTAGTGATCAGCATCAAGTCTCCAGCTAAGGACTCCAAGCTCTGCAAGTTTGTCGAGAGAGATAAACTCTTTAGGATCCTTGTGG
TGAGGAAGTCGCTGATCCTCTTGGCTATCATCCATGTACCATGCCTGTATCACTTCTTCTCTTCCATCCTTCACGGCTTCACCCAT
CGTCGTCTTCGTTATGCGTTTGTTCCCTTCCTCGTCTCCTCAAAACCACGCGAATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAR03591 ARD-like protein [Brassica juncea] | 1044 | 2e-111 |
| XP_002868260 ATARD2 [Arabidopsis lyrata subsp. lyrata] | 1002 | 1e-106 |
| NP_567441 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 [Arabidopsis thaliana] | 991 | 3e-105 |
| XP_002868258 ATARD1 [Arabidopsis lyrata subsp. lyrata] | 991 | 3e-105 |
| NP_567443 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 [Arabidopsis thaliana] | 979 | 6e-104 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8W108 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 | 991 | 1e-106 |
| Q8GXE2 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 | 979 | 3e-105 |
| O48707 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 | 883 | 4e-094 |
| A2XCT8 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 | 858 | 3e-091 |
| Q10RE5 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 | 858 | 3e-091 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6EFV7 ARD-like protein | 1044 | 1e-111 |
| Q0WSS4 Putative uncharacterized protein At4g14716 | 979 | 4e-104 |
| B3H6E4 Uncharacterized protein At4g14710.4 | 949 | 1e-100 |
| A8UGP3 Acireductone dioxygenase | 926 | 6e-098 |
| B9RTK2 Acireductone dioxygenase, putative | 914 | 2e-096 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G14710.1 acireductone dioxygenase [iron(II)-requiring]/ metal ion binding | 991 | 1e-107 |
| AT4G14710.2 acireductone dioxygenase [iron(II)-requiring]/ metal ion binding | 991 | 1e-107 |
| AT4G14716.1 ATARD1 (ACIREDUCTONE DIOXYGENASE 1); acireductone dioxygenase [iron(II)-requiring]/ metal ion binding | 979 | 3e-106 |
| AT4G14710.3 acireductone dioxygenase [iron(II)-requiring]/ metal ion binding | 979 | 3e-106 |
| AT4G14710.4 acireductone dioxygenase [iron(II)-requiring]/ metal ion binding | 949 | 8e-103 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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